GSMUA_Achr9G14570_001 (Musa acuminata)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 GSMUA_Achr9G14570_001 T219241_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HAT5
M06914_2.00 		Arabidopsis thaliana
NHAATAATTDW
WHAATTATTDN		 Dap-seq
OMalley et al.(2016)
HAT5_col_a 		0.858 0.860
HAT5
M06915_2.00 		Arabidopsis thaliana
WNYAATAATTRWDN
NHWYAATTATTRNW		 Dap-seq
OMalley et al.(2016)
HAT5_colamp_a 		0.858 0.860
HAT5
M02683_2.00 		Arabidopsis thaliana
SCAATAATTNNV
BNNAATTATTGS		 SELEX
Mathelier et al.(2014)
MA0008.2 		0.858 0.860
HAT5
M10624_2.00 		Arabidopsis thaliana
YSCAATAATTNNVN
NBNNAATTATTGSR		 Transfac
Matys et al.(2006)
P$ATHB1_01 		0.858 0.860
ATHB-16
M02050_2.00 		Arabidopsis thaliana
YAATMATT
AATKATTR		 PBM
Weirauch et al.(2014)
pTH7270 		0.813 0.789
estExt_gwp_gw1.C_70211
M02220_2.00 		Physcomitrella patens
HMATNANDNN
NNHNTNATKD		 PBM
Weirauch et al.(2014)
pTH8489 		0.813 0.789
ATHB-6
M02040_2.00 		Arabidopsis thaliana
HATNATTDN
NHAATNATD		 PBM
Weirauch et al.(2014)
pTH7670 		0.813 0.772
ATHB-6
M06909_2.00 		Arabidopsis thaliana
NNNHATKATTR
YAATMATDNNN		 Dap-seq
OMalley et al.(2016)
ATHB6_col_a 		0.813 0.772
ATHB-6
M06910_2.00 		Arabidopsis thaliana
NCAATAATTRN
NYAATTATTGN		 Dap-seq
OMalley et al.(2016)
ATHB6_colamp_a 		0.813 0.772
ATHB-13
M06900_2.00 		Arabidopsis thaliana
HYAATAATTDD
HHAATTATTRD		 Dap-seq
OMalley et al.(2016)
ATHB13_col_a 		0.796 0.737
ATHB-13
M06901_2.00 		Arabidopsis thaliana
NYAATAATTRW
WYAATTATTRN		 Dap-seq
OMalley et al.(2016)
ATHB13_colamp_a 		0.796 0.737
ATHB-5
M06932_2.00 		Arabidopsis thaliana
NYAATMATTND
HNAATKATTRN		 Dap-seq
OMalley et al.(2016)
ATHB5_col_a 		0.796 0.737
ATHB-5
M06933_2.00 		Arabidopsis thaliana
NYAATMATTN
NAATKATTRN		 Dap-seq
OMalley et al.(2016)
ATHB5_colamp_a 		0.796 0.737
ATHB-5
M02684_2.00 		Arabidopsis thaliana
CAATVATTGVVSV
BSBBCAATBATTG		 SELEX
Mathelier et al.(2014)
MA0110.2 		0.796 0.737
ATHB-5
M10630_2.00 		Arabidopsis thaliana
CAATVATTG
CAATBATTG		 Transfac
Matys et al.(2006)
P$ATHB5_01 		0.796 0.737
ATHB-21
M06907_2.00 		Arabidopsis thaliana
NNWHCAATWATTDN
NHAATWATTGDWNN		 Dap-seq
OMalley et al.(2016)
ATHB21_col_a 		0.723 0.649
ATHB-21
M06908_2.00 		Arabidopsis thaliana
WWDDNNNHAATWATTGDTNN
NNAHCAATWATTDNNNHHWW		 Dap-seq
OMalley et al.(2016)
ATHB21_colamp_a 		0.723 0.649
HB-5
M06924_2.00 		Arabidopsis thaliana
NNAHCAATWATTKDNNNHWWH
DWWDNNNHMAATWATTGDTNN		 Dap-seq
OMalley et al.(2016)
ATHB40_col_a 		0.722 0.649
HB-5
M06925_2.00 		Arabidopsis thaliana
HHAATWATTGDWNN
NNWHCAATWATTDD		 Dap-seq
OMalley et al.(2016)
ATHB40_colamp_a 		0.722 0.649
ATHB-53
M06934_2.00 		Arabidopsis thaliana
HMAATAATTRD
HYAATTATTKD		 Dap-seq
OMalley et al.(2016)
ATHB53_col_a 		0.718 0.614
ATHB-53
M06935_2.00 		Arabidopsis thaliana
NNWHCAATWATTDDN
NHHAATWATTGDWNN		 Dap-seq
OMalley et al.(2016)
ATHB53_colamp_a 		0.718 0.614
PK20392.1
M01250_2.00 		Cannabis sativa
NHAATMATDN
NHATKATTDN		 PBM
Lambert et al.(2019)
pTH11331 		0.657 0.737
PK20392.1
M01251_2.00 		Cannabis sativa
NHAATMATDN
NHATKATTDN		 PBM
Lambert et al.(2019)
pTH11332 		0.657 0.737
ATHB-20
M06912_2.00 		Arabidopsis thaliana
HYAATAATTRD
HYAATTATTRD		 Dap-seq
OMalley et al.(2016)
ATHB20_col_a 		0.637 0.702
ATHB-20
M06913_2.00 		Arabidopsis thaliana
HYAATMATTRD
HYAATKATTRD		 Dap-seq
OMalley et al.(2016)
ATHB20_colamp_a 		0.637 0.702
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr9P14570_001 Homeodomain 69 125

Links

Other Homeodomain family TFs
Other Musa acuminata TFs

802 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Esx1 Mus musculus ENSMUSG00000023443 D 0.000
CaO19.4000 Candida albicans CaO19.4000 D 0.000
KUCA_T00003449001 Kuraishia capsulata KUCA_T00003449001 I 0.000
ENSTBEG00000007985 Tupaia belangeri ENSTBEG00000007985 I 0.000
G210_1625 Candida maltosa G210_1625 I 0.000
GLOINDRAFT_4254 Rhizophagus irregularis GLOINDRAFT_4254 I 0.000
GNLVRS01_PISO0A02596g Millerozyma farinosa GNLVRS01_PISO0A02596g I 0.000
GNLVRS01_PISO0B02707g Millerozyma farinosa GNLVRS01_PISO0B02707g I 0.000
H311_01337 Anncaliia algerae H311_01337 I 0.000
H311_02306 Anncaliia algerae H311_02306 I 0.000
JL09_g3549 Pichia kudriavzevii JL09_g3549 I 0.000
Kpol_1043p24 Vanderwaltozyma polyspora Kpol_1043p24 I 0.000
Esx1 Rattus norvegicus ENSRNOG00000048011 I 0.000
ML021120a Mnemiopsis leidyi ML021120a I 0.000
PGUG_02484 Meyerozyma guilliermondii PGUG_02484 I 0.000
PICST_34942 Scheffersomyces stipitis PICST_34942 I 0.000
TBLA_0B07070 Tetrapisispora blattae TBLA_0B07070 I 0.000
TPHA_0C03620 Tetrapisispora phaffii TPHA_0C03620 I 0.000
fgenesh1_pm.C_chr_2.1000191 Pichia stipitis fgenesh1_pm.C_chr_2.1000191 I 0.000
Minc16296 Meloidogyne incognita Minc16296 I 0.000
TELCIR_13423 Teladorsagia circumcincta TELCIR_13423 I 0.000
CLUG_01830 Clavispora lusitaniae CLUG_01830 I 0.000
CPAG_03842 Candida parapsilosis CPAG_03842 I 0.000
PGUG_02484 Candida guilliermondii PGUG_02484 I 0.000
AWRI1499_3461 Brettanomyces bruxellensis AWRI1499_3461 I 0.000
BN7_141 Wickerhamomyces ciferrii BN7_141 I 0.000
CAGL0L07436g Candida glabrata CAGL0L07436g I 0.000
CANTEDRAFT_129585 Candida tenuis CANTEDRAFT_129585 I 0.000
CaO19.11483 Candida albicans CaO19.11483 I 0.000
CD36_54680 Candida dubliniensis CD36_54680 I 0.000
CGI_10013213 Crassostrea gigas CGI_10013213 I 0.000
ENSSTOG00000023781 Ictidomys tridecemlineatus ENSSTOG00000023781 I 0.000
CORT_0B02840 Candida orthopsilosis CORT_0B02840 I 0.000
CTRG_06116 Candida tropicalis CTRG_06116 I 0.000
DEHA2G21098g Debaryomyces hansenii DEHA2G21098g I 0.000
EDEG_02526 Edhazardia aedis EDEG_02526 I 0.000
ENSCAFG00000023214 Canis familiaris ENSCAFG00000023214 I 0.000
SEBOX Cavia porcellus ENSCPOG00000005498 I 0.000
SEBOX Pteropus vampyrus ENSPVAG00000002882 I 0.000
CLUG_01830 Candida lusitaniae CLUG_01830 I 0.000