HelroG195013 (Helobdella robusta)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 HelroG195013 T219470_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PBX2
M08134_2.00 		Homo sapiens
NWGAKTGACABN
NVTGTCAMTCWN		 ChIP-seq
Mathelier et al.(2014)
MA1113.1 		0.833 0.947
PBX2
M09165_2.00 		Homo sapiens
KRVHKTGATTGAWKN
NMWTCAATCAMDBYM		 Misc
Kulakovskiy et al.(2013)
PBX2_HUMAN.H11MO.0.C 		0.833 0.947
Pbx2
M09199_2.00 		Mus musculus
KRVHKTGATTGAWKN
NMWTCAATCAMDBYM		 Misc
Kulakovskiy et al.(2013)
PBX2_MOUSE.H11MO.0.C 		0.833 0.947
pbx4
M02110_2.00 		Tetraodon nigroviridis
TTGAYGDV
BHCRTCAA		 PBM
Weirauch et al.(2014)
pTH6425 		0.833 0.930
Pbx1
M00513_2.00 		Mus musculus
NNDKANNNN
NNNNTMHNN		 PBM
Berger et al.(2008)
Pbx1_3203 		0.833 0.912
PBX1
M05362_2.00 		Homo sapiens
NTGATKGAYR
YRTCMATCAN		 SELEX
Yin et al.(2017)
PBX1_eDBD_HT-SELEX 		0.833 0.912
PBX1
M05364_2.00 		Homo sapiens
DTGMTKGRYN
NRYCMAKCAH		 SELEX
Yin et al.(2017)
PBX1_FL_HT-SELEX 		0.833 0.912
PBX1
M02685_2.00 		Homo sapiens
WWTGATTGATND
HNATCAATCAWW		 SELEX
Mathelier et al.(2014)
MA0070.1 		0.833 0.912
PBX1
M09164_2.00 		Homo sapiens
DGABTGRCRG
CYGYCAVTCH		 Misc
Kulakovskiy et al.(2013)
PBX1_HUMAN.H11MO.0.A 		0.833 0.912
PBX1
M09561_2.00 		Homo sapiens
TGABTGACAGSC
GSCTGTCAVTCA		 Misc
Heinz et al.(2010)
MCF7-PBX1_GSE28007 		0.833 0.912
PBX1
M10748_2.00 		Homo sapiens
WTKATTRDT
AHYAATMAW		 Transfac
Matys et al.(2006)
V$PBX1_01 		0.833 0.912
PBX1
M10749_2.00 		Homo sapiens
DNHTTGATTGATKDB
VHMATCAATCAADNH		 Transfac
Matys et al.(2006)
V$PBX1_02 		0.833 0.912
PBX1
M10750_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PBX1_03 		0.833 0.912
PBX1
M10751_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PBX1_05 		0.833 0.912
PBX1
M10752_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PBX1_10 		0.833 0.912
PBX1
M10753_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PBX1_Q3 		0.833 0.912
PBX1
M05363_2.00 		Homo sapiens
DTGAKKGAYG
CRTCMMTCAH		 SELEX
Yin et al.(2017)
PBX1_eDBD_Methyl-HT-SELEX 		0.833 0.912
PBX1
M05365_2.00 		Homo sapiens
MRTCAATCMH
DKGATTGAYK		 SELEX
Yin et al.(2017)
PBX1_FL_Methyl-HT-SELEX 		0.833 0.912
Pbx3
M09205_2.00 		Mus musculus
BBBTGATTGRYNDN
NHNRYCAATCAVVV		 Misc
Kulakovskiy et al.(2013)
PBX3_MOUSE.H11MO.0.A 		0.831 0.912
exd
M06487_2.00 		Drosophila melanogaster
YRTCAAAN
NTTTGAYR		 B1H
Mathelier et al.(2014)
MA0222.1 		0.788 0.930
exd
M06243_2.00 		Drosophila melanogaster
YRTCAAAN
NTTTGAYR		 B1H
Zhu et al.(2011)
Exd_Cell_FBgn0000611 		0.788 0.930
exd
M06244_2.00 		Drosophila melanogaster
NWRNWYNAAA
TTTNRWNYWN		 B1H
Zhu et al.(2011)
exd_FlyReg_FBgn0000611 		0.788 0.930
exd
M06245_2.00 		Drosophila melanogaster
NDTGAYRW
WYRTCAHN		 B1H
Zhu et al.(2011)
exd_SOLEXA_2_FBgn0000611 		0.788 0.930
exd
M06246_2.00 		Drosophila melanogaster
NNDTGAYR
YRTCAHNN		 B1H
Zhu et al.(2011)
Exd_SOLEXA_FBgn0000611 		0.788 0.930
PBX4
M00277_2.00 		Homo sapiens
NNDDWHDNNN
NNNHDWHHNN		 PBM
Barrera et al.(2016)
PBX4_REF 		0.782 0.895
PBX4
M10649_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PBX4_01 		0.782 0.895
CBG10835
M01243_2.00 		Caenorhabditis briggsae
NNTKAYDNN
NNHRTMANN		 PBM
Lambert et al.(2019)
pTH11444 		0.724 0.579
PBX4
M00276_2.00 		Homo sapiens
NYTAATTADNN
NNHTAATTARN		 PBM
Barrera et al.(2016)
PBX4_R215Q 		0.644 0.877
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
HelroP195013 Homeodomain 237 296

Links

Other Homeodomain family TFs
Other Helobdella robusta TFs

432 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
NCU04663 Neurospora crassa NCU04663 D
MGU_05623 Metarhizium guizhouense MGU_05623 I
SBOR_3621 Sclerotinia borealis SBOR_3621 I
SAPIO_CDS8637 Scedosporium apiospermum SAPIO_CDS8637 I
S40288_07421 Stachybotrys chartarum S40288_07421 I
PV07_06437 Cladophialophora immunda PV07_06437 I
PMAA_070340 Talaromyces marneffei PMAA_070340 I
PFICI_07122 Pestalotiopsis fici PFICI_07122 I
OIDMADRAFT_112327 Oidiodendron maius OIDMADRAFT_112327 I
NEUTE1DRAFT_120420 Neurospora tetrasperma NEUTE1DRAFT_120420 I
NechaG40581 Fusarium solani NechaG40581 I
SPBR_06325 Sporothrix brasiliensis SPBR_06325 I
MBR_04335 Metarhizium brunneum MBR_04335 I
MBM_05016 Marssonina brunnea MBM_05016 I
MAM_05041 Metarhizium album MAM_05041 I
MAC_03900 Metarhizium acridum MAC_03900 I
HMPREF1624_07464 Sporothrix schenckii HMPREF1624_07464 I
H072_8333 Dactylellina haptotyla H072_8333 I
GSTUM_00005598001 Tuber melanosporum GSTUM_00005598001 I
VDAG_00161 Verticillium dahliae VDAG_00161 I
PMAA_070340 Penicillium marneffei PMAA_070340 I
estExt_fgenesh1_pg.C_70327 Cryphonectria parasitica estExt_fgenesh1_pg.C_70327 I
estExt_fgenesh3_pm.C_140174 Neurospora discreta estExt_fgenesh3_pm.C_140174 I
e_gw1.5.1042.1 Nectria haematococca e_gw1.5.1042.1 I
X797_011716 Metarhizium robertsii X797_011716 I
VHEMI03393 Torrubiella hemipterigena VHEMI03393 I
VHEMI00437 Torrubiella hemipterigena VHEMI00437 I
VDBG_00550 Verticillium alfalfae VDBG_00550 I
SMAC_08342 Sordaria macrospora SMAC_08342 I
UV8b_4097 Ustilaginoidea virens UV8b_4097 I
TSTA_090670 Talaromyces stipitatus TSTA_090670 I
TRIVIDRAFT_122714 Trichoderma virens TRIVIDRAFT_122714 I
TRIREDRAFT_49372 Trichoderma reesei TRIREDRAFT_49372 I
TRIATDRAFT_161814 Trichoderma atroviride TRIATDRAFT_161814 I
THITE_40970 Thielavia terrestris THITE_40970 I
SS1G_05371 Sclerotinia sclerotiorum SS1G_05371 I
MAJ_05180 Metarhizium majus MAJ_05180 I
BGHDH14_bgh01821 Blumeria graminis BGHDH14_bgh01821 I
CSUB01_09138 Colletotrichum sublineola CSUB01_09138 I
CSUB01_08337 Colletotrichum sublineola CSUB01_08337 I
GLRG_07449 Colletotrichum graminicola GLRG_07449 I
Cob_02185 Colletotrichum orbiculare Cob_02185 I
CMQ_2744 Grosmannia clavigera CMQ_2744 I
CHGG_00505 Chaetomium globosum CHGG_00505 I
CH063_07213 Colletotrichum higginsianum CH063_07213 I
CGGC5_10205 Colletotrichum gloeosporioides CGGC5_10205 I
CFIO01_02322 Colletotrichum fioriniae CFIO01_02322 I
CPUR_01702 Claviceps purpurea CPUR_01702 I
Bcin09g02560 Botrytis cinerea Bcin09g02560 I
BBA_08191 Beauveria bassiana BBA_08191 I
AUEXF2481DRAFT_25614 Aureobasidium subglaciale AUEXF2481DRAFT_25614 I
ACRE_088710 Acremonium chrysogenum ACRE_088710 I
A1O9_13001 Exophiala aquamarina A1O9_13001 I
A1O9_03542 Exophiala aquamarina A1O9_03542 I
A1O3_03291 Capronia epimyces A1O3_03291 I
VDBG_00550 Verticillium albo atrum VDBG_00550 I
FPSE_00499 Fusarium pseudograminearum FPSE_00499 I
FVEG_02723 Fusarium verticillioides FVEG_02723 I
FOXG_14277 Fusarium oxysporum FOXG_14277 I
FOXG_05408 Fusarium oxysporum FOXG_05408 I
FGRRES_17309 Fusarium graminearum FGRRES_17309 I
CTHT_0050850 Chaetomium thermophilum CTHT_0050850 I
DRE_04286 Drechslerella stenobrocha DRE_04286 I
FFUJ_07449 Fusarium fujikuroi FFUJ_07449 I
F503_05733 Ophiostoma piceae uamh F503_05733 I
EV44_g6283 Erysiphe necator EV44_g6283 I
Z517_10110 Fonsecaea pedrosoi Z517_10110 N
HMPREF1541_04418 Cyphellophora europaea HMPREF1541_04418 N
G647_04707 Cladophialophora carrionii G647_04707 N
Z518_01742 Rhinocladiella mackenziei Z518_01742 N
Z519_00024 Cladophialophora bantiana Z519_00024 N
A1O7_03671 Cladophialophora yegresii A1O7_03671 N
A1O5_00025 Cladophialophora psammophila A1O5_00025 N
HMPREF1120_05352 Exophiala dermatitidis HMPREF1120_05352 N
A1O1_08282 Capronia coronata A1O1_08282 N
PV06_00266 Exophiala oligosperma PV06_00266 N
AOL_s00083g362 Arthrobotrys oligospora AOL_s00083g362 N
CIMG_00917 Coccidioides immitis CIMG_00917 N
EPUS_07292 Endocarpon pusillum EPUS_07292 N
SPBR_06586 Sporothrix brasiliensis SPBR_06586 N
CPC735_054240 Coccidioides posadasii CPC735_054240 N
PV04_03866 Capronia semiimmersa PV04_03866 N
PV05_05583 Exophiala xenobiotica PV05_05583 N
PV11_00815 Exophiala sideris PV11_00815 N
PV10_05308 Exophiala mesophila PV10_05308 N
PV08_04106 Exophiala spinifera PV08_04106 N