L798_10520 (Zootermopsis nevadensis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 L798_10520 T219965_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
VSX1
M03087_2.00 		Homo sapiens
YTAATTAN
NTAATTAR		 SELEX
Jolma et al.(2013)
VSX1_1 		0.790 0.500
VSX1
M03088_2.00 		Homo sapiens
NNYAATTRRBN
NVYYAATTRNN		 SELEX
Jolma et al.(2013)
VSX1_2 		0.790 0.500
VSX1
M04941_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_HT-SELEX 		0.790 0.500
VSX1
M04944_2.00 		Homo sapiens
NTAATTRS
SYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_HT-SELEX 		0.790 0.500
VSX1
M05869_2.00 		Homo sapiens
DGCTAATTAN
NTAATTAGCH		 SMiLE-seq
Isakova et al.(2017)
VSX1 		0.790 0.500
VSX1
M04942_2.00 		Homo sapiens
NTAAYGMN
NKCRTTAN		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_1 		0.790 0.500
VSX1
M04943_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_2 		0.790 0.500
VSX1
M04945_2.00 		Homo sapiens
NTAATTRG
CYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_1 		0.790 0.500
VSX1
M04946_2.00 		Homo sapiens
NTAAYGAN
NTCRTTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_2 		0.790 0.500
VAX1
M03168_2.00 		Homo sapiens
YTAATKAN
NTMATTAR		 SELEX
Jolma et al.(2013)
VAX1_1 		0.715 0.370
VAX1
M05182_2.00 		Homo sapiens
BTAATTRN
NYAATTAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_HT-SELEX 		0.715 0.370
VAX1
M05183_2.00 		Homo sapiens
BTMATKRN
NYMATKAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_Methyl-HT-SELEX 		0.715 0.370
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KDR15575 Homeodomain 148 193

Links

Other Homeodomain family TFs
Other Zootermopsis nevadensis TFs

1244 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Traes_5DS_620A46565 Triticum aestivum Traes_5DS_620A46565 N
OS06G0166100 Oryza sativa OS06G0166100 N
OS12G0160900 Oryza sativa OS12G0160900 N
Sb02g034560 Sorghum bicolor Sb02g034560 N
Sb04g022400 Sorghum bicolor Sb04g022400 N
Sb08g003780 Sorghum bicolor Sb08g003780 N
Si009370m.g Setaria italica Si009370m.g N
Si016477m.g Setaria italica Si016477m.g N
Si029002m.g Setaria italica Si029002m.g N
Traes_5AS_385093B54 Triticum aestivum Traes_5AS_385093B54 N
Traes_5BS_BCC406654 Triticum aestivum Traes_5BS_BCC406654 N
OS02G0550900 Oryza sativa OS02G0550900 N
Traes_7BS_1B525AFF5 Triticum aestivum Traes_7BS_1B525AFF5 N
Traes_7DS_559DD9894 Triticum aestivum Traes_7DS_559DD9894 N
TRIUR3_03719 Triticum urartu TRIUR3_03719 N
TRIUR3_25143 Triticum urartu TRIUR3_25143 N
Pavir.Aa01718 Panicum virgatum Pavir.Aa01718 N
Pavir.Ba00843 Panicum virgatum Pavir.Ba00843 N
Pavir.Bb02863 Panicum virgatum Pavir.Bb02863 N
Pavir.Ca00202 Panicum virgatum Pavir.Ca00202 N
Pavir.Cb02030 Panicum virgatum Pavir.Cb02030 N
PDK_20s1320921g004 Phoenix dactylifera PDK_20s1320921g004 N
OB02G27690 Oryza brachyantha OB02G27690 N
BGIOSGA022378 Oryza indica BGIOSGA022378 N
BGIOSGA037035 Oryza indica BGIOSGA037035 N
BRADI1G48350 Brachypodium distachyon BRADI1G48350 N
BRADI3G45470 Brachypodium distachyon BRADI3G45470 N
BRADI4G41960 Brachypodium distachyon BRADI4G41960 N
GRMZM2G034868 Zea mays GRMZM2G034868 N
GRMZM2G043250 Zea mays GRMZM2G043250 N
GRMZM2G048987 Zea mays GRMZM2G048987 N
MLOC_13034 Hordeum vulgare MLOC_13034 N
MLOC_62808 Hordeum vulgare MLOC_62808 N
BGIOSGA006277 Oryza indica BGIOSGA006277 N
OB06G14070 Oryza brachyantha OB06G14070 N
OB12G13670 Oryza brachyantha OB12G13670 N
OLONG_000187 Oryza longistaminata OLONG_000187 N
OLONG_014957 Oryza longistaminata OLONG_014957 N
ONIVA02G22250 Oryza nivara ONIVA02G22250 N
ONIVA06G05610 Oryza nivara ONIVA06G05610 N
ORGLA02G0172700 Oryza glaberrima ORGLA02G0172700 N
ORGLA06G0040800 Oryza glaberrima ORGLA06G0040800 N
ORGLA12G0035900 Oryza glaberrima ORGLA12G0035900 N