LOAG_18385 (Loa loa)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 LOAG_18385 T220061_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Six3
M00483_2.00 		Mus musculus
NNNAYMN
NKRTNNN		 PBM
Berger et al.(2008)
Six3_1732 		0.834 0.912
SIX3
M05159_2.00 		Homo sapiens
NNYGATABBN
NVVTATCRNN		 SELEX
Yin et al.(2017)
SIX3_eDBD_HT-SELEX 		0.834 0.912
SIX3
M10698_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SIX3_Q6 		0.834 0.912
SIX3
M05160_2.00 		Homo sapiens
NNYGATABVB
VBVTATCRNN		 SELEX
Yin et al.(2017)
SIX3_eDBD_Methyl-HT-SELEX 		0.834 0.912
Optix
M02124_2.00 		Drosophila melanogaster
NNNNNDATMN
NKATHNNNNN		 PBM
Weirauch et al.(2014)
pTH5437 		0.834 0.877
Optix
M03850_2.00 		Drosophila melanogaster
TAATYTAATTA
TAATTARATTA		 SELEX
Nitta et al.(2015)
Optix_1 		0.834 0.877
Optix
M06526_2.00 		Drosophila melanogaster
TGATA
TATCA		 B1H
Mathelier et al.(2014)
MA0199.1 		0.834 0.877
Optix
M06327_2.00 		Drosophila melanogaster
HHVTGATA
TATCABDD		 B1H
Zhu et al.(2011)
Optix_Cell_FBgn0025360 		0.834 0.877
Optix
M06328_2.00 		Drosophila melanogaster
NNNTGATA
TATCANNN		 B1H
Zhu et al.(2011)
Optix_SOLEXA_FBgn0025360 		0.834 0.877
SIX6
M00326_2.00 		Homo sapiens
NNDATMB
VKATHNN		 PBM
Barrera et al.(2016)
SIX6_REF 		0.833 0.895
Six6
M00169_2.00 		Mus musculus
NNAYMNN
NNKRTNN		 PBM
Badis et al.(2009)
Six6_2267 		0.833 0.895
Six6
M00412_2.00 		Mus musculus
NNNTGATAYCN
NGRTATCANNN		 PBM
Berger et al.(2008)
Six6_2267 		0.833 0.895
SIX6
M05357_2.00 		Homo sapiens
NNYGATASVB
VBSTATCRNN		 SELEX
Yin et al.(2017)
SIX6_eDBD_HT-SELEX 		0.833 0.895
SIX6
M00325_2.00 		Homo sapiens
NNNDATMB
VKATHNNN		 PBM
Barrera et al.(2016)
SIX6_H141N 		0.833 0.895
SIX6
M05358_2.00 		Homo sapiens
VBVYAYCRNN
NNYGRTRBVB		 SELEX
Yin et al.(2017)
SIX6_eDBD_Methyl-HT-SELEX 		0.833 0.895
six3
M02102_2.00 		Oryzias latipes
NNDAYMBNNN
NNNVKRTHNN		 PBM
Weirauch et al.(2014)
pTH5928 		0.833 0.877
SIX6
M00327_2.00 		Homo sapiens
NHDAYMBNN
NNVKRTHDN		 PBM
Barrera et al.(2016)
SIX6_T165A 		0.827 0.877
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EJD74276.1 Homeodomain 174 230

Links

Other Homeodomain family TFs
Other Loa loa TFs

297 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TRIVIDRAFT_30358 Trichoderma virens TRIVIDRAFT_30358 I
MBR_00130 Metarhizium brunneum MBR_00130 N
e_gw1.43.159.1 Nectria haematococca e_gw1.43.159.1 N
X797_002485 Metarhizium robertsii X797_002485 N
VHEMI09845 Torrubiella hemipterigena VHEMI09845 N
TRIREDRAFT_53067 Trichoderma reesei TRIREDRAFT_53067 N
TRIATDRAFT_214226 Trichoderma atroviride TRIATDRAFT_214226 N
S40288_02302 Stachybotrys chartarum S40288_02302 N
S40285_07528 Stachybotrys chlorohalonata S40285_07528 N
NechaG49678 Fusarium solani NechaG49678 N
MGU_09467 Metarhizium guizhouense MGU_09467 N
BBA_00886 Beauveria bassiana BBA_00886 N
MANI_022807 Metarhizium anisopliae MANI_022807 N
MAM_07435 Metarhizium album MAM_07435 N
MAJ_05893 Metarhizium majus MAJ_05893 N
MAC_05468 Metarhizium acridum MAC_05468 N
FVEG_03514 Fusarium verticillioides FVEG_03514 N
FPSE_04048 Fusarium pseudograminearum FPSE_04048 N
FOXG_05661 Fusarium oxysporum FOXG_05661 N
FGRRES_16424 Fusarium graminearum FGRRES_16424 N
FFUJ_03786 Fusarium fujikuroi FFUJ_03786 N
CCM_02835 Cordyceps militaris CCM_02835 N