NEMVEDRAFT_v1g101664 (Nematostella vectensis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 NEMVEDRAFT_v1g101664 T220966_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NEMVEDRAFT_v1g101664
M02142_2.00		 Nematostella vectensis
WATCRATC
GATYGATW		 PBM
Weirauch et al.(2014)
pTH5552		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q0N4H9_NEMVE
M02165_2.00 		Nematostella vectensis
NNYRWWNNN
NNNWWYRNN		 PBM
Weirauch et al.(2014)
pTH6101 		0.609 0.526
NEMVEDRAFT_v1g129868
M02146_2.00 		Nematostella vectensis
NYRAWNDNN
NNHNWTYRN		 PBM
Weirauch et al.(2014)
pTH5749 		0.605 0.491
CBG20882
M01244_2.00 		Caenorhabditis briggsae
NDHDATDRN
NYHATHDHN		 PBM
Lambert et al.(2019)
pTH11477 		0.604 0.456
For this family, TFs with SR scores > 0.599 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M02142_2.00 Homeodomain 1 57

DNA Binding Domains

Protein ID Domain From To Sequence
EDO42162 Homeodomain 2 58

Links

Other Homeodomain family TFs
Other Nematostella vectensis TFs

35 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CBG20882 Caenorhabditis briggsae CBG20882 D 0.604
NEMVEDRAFT_v1g129868 Nematostella vectensis NEMVEDRAFT_v1g129868 D 0.605
Q0N4H9_NEMVE Nematostella vectensis Q0N4H9_NEMVE D 0.609
OESDEN_04475 Oesophagostomum dentatum OESDEN_04475 I 0.604
L889_g20178 Steinernema feltiae L889_g20178 I 0.604
L892_g19633 Steinernema scapterisci L892_g19633 I 0.604
L893_g33275 Steinernema glaseri L893_g33275 I 0.604
L898_g27087 Steinernema monticolum L898_g27087 I 0.604
MhA1_Contig3007.frz3.gene1 Meloidogyne hapla MhA1_Contig3007.frz3.gene1 I 0.604
nAv.1.0.1.g08977 Acanthocheilonema viteae nAv.1.0.1.g08977 I 0.604
nDi.2.2.2.g10428 Dirofilaria immitis nDi.2.2.2.g10428 I 0.604
NECAME_04088 Necator americanus NECAME_04088 I 0.604
HPBE_0000494401 Heligmosomoides bakeri HPBE_0000494401 I 0.604
PTRK_0001611100 Parastrongyloides trichosuri PTRK_0001611100 I 0.604
RSKR_0000858500 Rhabditophanes kr3021 RSKR_0000858500 I 0.604
SMUV_0000883501 Syphacia muris SMUV_0000883501 I 0.604
SPAL_0000200500 Strongyloides papillosus SPAL_0000200500 I 0.604
SSTP_0000810600 Strongyloides stercoralis SSTP_0000810600 I 0.604
SVE_0040200 Strongyloides venezuelensis SVE_0040200 I 0.604
L596_g14027 Steinernema carpocapsae L596_g14027 I 0.604
HPLM_0001265501 Haemonchus placei HPLM_0001265501 I 0.604
HCOI01570100 Haemonchus contortus HCOI01570100 I 0.604
Hba_19656 Heterorhabditis bacteriophora Hba_19656 I 0.604
DME_0000725401 Dracunculus medinensis DME_0000725401 I 0.604
BXY_1079800 Bursaphelenchus xylophilus BXY_1079800 I 0.604
ASU_03476 Ascaris suum ASU_03476 I 0.604
ANCCAN_26601 Ancylostoma caninum ANCCAN_26601 I 0.604
WBGene00249134 Onchocerca volvulus WBGene00249134 I 0.604
cog-1 Caenorhabditis elegans WBGene00000584 I 0.604
tetur41g00450 Tetranychus urticae tetur41g00450 I 0.613
NEMVEDRAFT_v1g58683 Nematostella vectensis NEMVEDRAFT_v1g58683 I 0.664
CRE26343 Caenorhabditis remanei CRE26343 I 0.604
CJA08090 Caenorhabditis japonica CJA08090 I 0.604
CBN16986 Caenorhabditis brenneri CBN16986 I 0.604
CBN06208 Caenorhabditis brenneri CBN06208 I 0.604