OMERI03G04590 (Oryza meridionalis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 OMERI03G04590 T221564_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATH1
M10627_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATH1_01 		0.827 0.729
Q5EVH4_OIKDI
M02227_2.00 		Oikopleura dioica
NTGACAKN
NMTGTCAN		 PBM
Weirauch et al.(2014)
pTH6041 		0.638 0.583
MEIS3
M03093_2.00 		Homo sapiens
DTGACANN
NNTGTCAH		 SELEX
Jolma et al.(2013)
MEIS3_1 		0.606 0.417
MEIS3
M03094_2.00 		Homo sapiens
TGACAGSTGTCA
TGACASCTGTCA		 SELEX
Jolma et al.(2013)
MEIS3_2 		0.606 0.417
MEIS3
M04951_2.00 		Homo sapiens
TGWCABVTGWCA
TGWCABVTGWCA		 SELEX
Yin et al.(2017)
MEIS3_eDBD_HT-SELEX 		0.606 0.417
MEIS3
M04952_2.00 		Homo sapiens
YGWCABVTGWCR
YGWCABVTGWCR		 SELEX
Yin et al.(2017)
MEIS3_eDBD_Methyl-HT-SELEX 		0.606 0.417
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OMERI03G04590.1 Homeodomain 341 391

Links

Other Homeodomain family TFs
Other Oryza meridionalis TFs

1007 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AEBP2 Taeniopygia guttata ENSTGUG00000012348 N 0.000
ENSOARG00000020470 Ovis aries ENSOARG00000020470 N 0.000
ENSOCUG00000016677 Oryctolagus cuniculus ENSOCUG00000016677 N 0.000
AEBP2 Otolemur garnettii ENSOGAG00000017202 N 0.000
AEBP2 Ochotona princeps ENSOPRG00000014454 N 0.000
ENSPANG00000010276 Papio anubis ENSPANG00000010276 N 0.000
ENSPPYG00000004345 Pongo abelii ENSPPYG00000004345 N 0.000
ENSPSIG00000002184 Pelodiscus sinensis ENSPSIG00000002184 N 0.000
AEBP2 Pan troglodytes ENSPTRG00000004747 N 0.000
AEBP2 Pteropus vampyrus ENSPVAG00000008104 N 0.000
Aebp2 Rattus norvegicus ENSRNOG00000008929 N 0.000
ENSSARG00000010983 Sorex araneus ENSSARG00000010983 N 0.000
AEBP2 Sus scrofa ENSSSCG00000000587 N 0.000
ENSNLEG00000004553 Nomascus leucogenys ENSNLEG00000004553 N 0.000
AEBP2 Tursiops truncatus ENSTTRG00000011776 N 0.000
ENSVPAG00000008562 Vicugna pacos ENSVPAG00000008562 N 0.000
Aan_R011750 Calypte anna Aan_R011750 N 0.000
Afo_R006263 Aptenodytes forsteri Afo_R006263 N 0.000
Alligator_sinensis_CCG011535.1 Alligator sinensis Alligator_sinensis_CCG011535.1 N 0.000
ENSP00000381840-D1 Bos grunniens ENSP00000381840-D1 N 0.000
ENSP00000381840 Macaca fascicularis ENSP00000381840 N 0.000
Gfo_R002231 Geospiza fortis Gfo_R002231 N 0.000
Myotis_brandtii_PLEKHA5_10031422 Myotis brandtii Myotis_brandtii_PLEKHA5_10031422 N 0.000
Tal_R009212 Tyto alba Tal_R009212 N 0.000
aebp2.L Xenopus laevis XB-GENE-6251879 N 0.000
ENSGALG00000013136 Gallus gallus ENSGALG00000013136 N 0.000
ENSAPLG00000008722 Anas platyrhynchos ENSAPLG00000008722 N 0.000
AEBP2 Bos taurus ENSBTAG00000010818 N 0.000
AEBP2 Canis familiaris ENSCAFG00000012441 N 0.000
ENSCJAG00000001342 Callithrix jacchus ENSCJAG00000001342 N 0.000
AEBP2 Cavia porcellus ENSCPOG00000007440 N 0.000
ENSCSAG00000008085 Chlorocebus sabaeus ENSCSAG00000008085 N 0.000
AEBP2 Dasypus novemcinctus ENSDNOG00000014519 N 0.000
AEBP2 Equus caballus ENSECAG00000012977 N 0.000
ENSETEG00000006095 Echinops telfairi ENSETEG00000006095 N 0.000
ENSFALG00000001055 Ficedula albicollis ENSFALG00000001055 N 0.000
AEBP2 Felis catus ENSFCAG00000031640 N 0.000
AEBP2 Homo sapiens ENSG00000139154 N 0.000
ENSAMEG00000012706 Ailuropoda melanoleuca ENSAMEG00000012706 N 0.000
AEBP2 Gorilla gorilla ENSGGOG00000002023 N 0.000
ENSLACG00000010628 Latimeria chalumnae ENSLACG00000010628 N 0.000
AEBP2 Loxodonta africana ENSLAFG00000020685 N 0.000
ENSLOCG00000015421 Lepisosteus oculatus ENSLOCG00000015421 N 0.000
ENSMEUG00000010574 Macropus eugenii ENSMEUG00000010574 N 0.000
ENSMGAG00000013591 Meleagris gallopavo ENSMGAG00000013591 N 0.000
AEBP2 Myotis lucifugus ENSMLUG00000006293 N 0.000
AEBP2 Macaca mulatta ENSMMUG00000016243 N 0.000
ENSMODG00000017867 Monodelphis domestica ENSMODG00000017867 N 0.000
ENSMPUG00000011420 Mustela putorius furo ENSMPUG00000011420 N 0.000
Aebp2 Mus musculus ENSMUSG00000030232 N 0.000