HOX1 (Oryza sativa)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 OS10G0561800 T222052_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATHB-4
M01065_2.00 		Arabidopsis thaliana
NBMTGCATRNN
NNYATGCAKVN		 PBM
Sullivan et al.(2014)
pTH8184 		0.840 0.877
ATHB-4
M02042_2.00 		Arabidopsis thaliana
NNWTNATTRN
NYAATNAWNN		 PBM
Weirauch et al.(2014)
pTH8667 		0.840 0.877
HAT3
M00728_2.00 		Arabidopsis thaliana
DTGATTRV
BYAATCAH		 PBM
Chang et al.(2013)
pTH7400 		0.840 0.860
HAT2
M06929_2.00 		Arabidopsis thaliana
NHAATGATTRN
NYAATCATTDN		 Dap-seq
OMalley et al.(2016)
HAT2_colamp_a 		0.789 0.860
HAT2
M06930_2.00 		Arabidopsis thaliana
WNYAATCATWD
HWATGATTRNW		 Dap-seq
OMalley et al.(2016)
HAT2_col_v31 		0.789 0.860
HAT22
M06926_2.00 		Arabidopsis thaliana
NNYAATCATT
AATGATTRNN		 Dap-seq
OMalley et al.(2016)
HAT22_col_a 		0.781 0.825
HAT1
M02047_2.00 		Arabidopsis thaliana
NMATGATTRN
NYAATCATKN		 PBM
Weirauch et al.(2014)
pTH8107 		0.756 0.860
HAT1
M06922_2.00 		Arabidopsis thaliana
NHAATGATTRNNWDW
WHWNNYAATCATTDN		 Dap-seq
OMalley et al.(2016)
HAT1_col_a 		0.756 0.860
HAT1
M06923_2.00 		Arabidopsis thaliana
NYAATCATTDN
NHAATGATTRN		 Dap-seq
OMalley et al.(2016)
HAT1_colamp_a 		0.756 0.860
ATHB-X
M06902_2.00 		Arabidopsis thaliana
HHAATRATTRN
NYAATYATTDD		 Dap-seq
OMalley et al.(2016)
ATHB18_col_a 		0.728 0.632
ATHB-X
M06903_2.00 		Arabidopsis thaliana
NYAATGATTRV
BYAATCATTRN		 Dap-seq
OMalley et al.(2016)
ATHB18_colamp_a 		0.728 0.632
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OS10T0561800-01 Homeodomain 155 211

Links

Other Homeodomain family TFs
Other Oryza sativa TFs

693 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
V565_004480 Rhizoctonia solani V565_004480 I
PLEOSDRAFT_1029614 Pleurotus ostreatus PLEOSDRAFT_1029614 N
M408DRAFT_326089 Serendipita vermifera M408DRAFT_326089 N
M413DRAFT_440930 Hebeloma cylindrosporum M413DRAFT_440930 N
Moror_1059 Moniliophthora roreri Moror_1059 N
PAXRUDRAFT_13206 Paxillus rubicundulus PAXRUDRAFT_13206 N
PHACADRAFT_249397 Phanerochaete carnosa PHACADRAFT_249397 N
PHLGIDRAFT_35648 Phlebiopsis gigantea PHLGIDRAFT_35648 N
PIIN_03370 Piriformospora indica PIIN_03370 N
PILCRDRAFT_811082 Piloderma croceum PILCRDRAFT_811082 N
PISMIDRAFT_670921 Pisolithus microcarpus PISMIDRAFT_670921 N
M408DRAFT_220715 Serendipita vermifera M408DRAFT_220715 N
SCHCODRAFT_47142 Schizophyllum commune SCHCODRAFT_47142 N
SCLCIDRAFT_1210054 Scleroderma citrinum SCLCIDRAFT_1210054 N
SERLA73DRAFT_177169 Serpula lacrymans SERLA73DRAFT_177169 N
V565_033130 Rhizoctonia solani V565_033130 N
V565_035960 Rhizoctonia solani V565_035960 N
fgenesh1_pg.C_scaffold_2000701 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_2000701 N
e_gw1.4.2249.1 Heterobasidion annosum e_gw1.4.2249.1 N
GALMADRAFT_23139 Galerina marginata GALMADRAFT_23139 N
BN946_scf184908.g73 Trametes cinnabarina BN946_scf184908.g73 N
BOTBODRAFT_26713 Botryobasidium botryosum BOTBODRAFT_26713 N
BOTBODRAFT_26714 Botryobasidium botryosum BOTBODRAFT_26714 N
BOTBODRAFT_72561 Botryobasidium botryosum BOTBODRAFT_72561 N
CC1G_00050 Coprinopsis cinerea CC1G_00050 N
CERSUDRAFT_111398 Ceriporiopsis subvermispora CERSUDRAFT_111398 N
CY34DRAFT_808328 Suillus luteus CY34DRAFT_808328 N
FIBRA_01455 Fibroporia radiculosa FIBRA_01455 N
FOMPIDRAFT_138732 Fomitopsis pinicola FOMPIDRAFT_138732 N
AGABI2DRAFT_191713 Agaricus bisporus AGABI2DRAFT_191713 N
GLOTRDRAFT_55344 Gloeophyllum trabeum GLOTRDRAFT_55344 N
HETIRDRAFT_240562 Heterobasidion irregulare HETIRDRAFT_240562 N
JAAARDRAFT_28293 Jaapia argillacea JAAARDRAFT_28293 N
K443DRAFT_672537 Laccaria amethystina K443DRAFT_672537 N
M378DRAFT_8932 Amanita muscaria M378DRAFT_8932 N
M404DRAFT_92668 Pisolithus tinctorius M404DRAFT_92668 N
M407DRAFT_127438 Tulasnella calospora M407DRAFT_127438 N
M407DRAFT_91983 Tulasnella calospora M407DRAFT_91983 N