SS1G_00669 (Sclerotinia sclerotiorum)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 SS1G_00669 T223777_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NCU09556
M02226_2.00 		Neurospora crassa
TTAATWTA
TAWATTAA		 PBM
Weirauch et al.(2014)
pTH8955 		0.862 0.982
Q0UJ27_PHANO_CONSTRUCT
M02202_2.00 		PBM CONSTRUCTS
NYAATHWNN
NNWDATTRN		 PBM
Weirauch et al.(2014)
pTH6773 		0.781 0.895
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EDN91266 Homeodomain 178 235

Links

Other Homeodomain family TFs
Other Sclerotinia sclerotiorum TFs

105 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Sb07g025310 Sorghum bicolor Sb07g025310 I 0.000
ORGLA08G0221300 Oryza glaberrima ORGLA08G0221300 I 0.000
ORGLA09G0131400 Oryza glaberrima ORGLA09G0131400 I 0.000
ORUFI08G24840 Oryza rufipogon ORUFI08G24840 I 0.000
ORUFI09G17940 Oryza rufipogon ORUFI09G17940 I 0.000
OS08G0543700 Oryza sativa OS08G0543700 I 0.000
BGIOSGA026551 Oryza indica BGIOSGA026551 I 0.000
Sb02g030110 Sorghum bicolor Sb02g030110 I 0.000
Sb02g030120 Sorghum bicolor Sb02g030120 I 0.000
OS09G0519100 Oryza sativa OS09G0519100 I 0.000
Si015513m.g Setaria italica Si015513m.g I 0.000
Si031900m.g Setaria italica Si031900m.g I 0.000
Si032741m.g Setaria italica Si032741m.g I 0.000
Pavir.Ba01305 Panicum virgatum Pavir.Ba01305 I 0.000
Pavir.Ba01307 Panicum virgatum Pavir.Ba01307 I 0.000
Pavir.J01049 Panicum virgatum Pavir.J01049 I 0.000
Pavir.J40111 Panicum virgatum Pavir.J40111 I 0.000
ONIVA08G25370 Oryza nivara ONIVA08G25370 I 0.000
BGIOSGA029426 Oryza indica BGIOSGA029426 I 0.000
GRMZM2G013688 Zea mays GRMZM2G013688 I 0.000
GRMZM2G038479 Zea mays GRMZM2G038479 I 0.000
GRMZM2G107560 Zea mays GRMZM2G107560 I 0.000
LPERR03G22350 Leersia perrieri LPERR03G22350 I 0.000
LPERR08G19100 Leersia perrieri LPERR08G19100 I 0.000
OMERI08G17270 Oryza meridionalis OMERI08G17270 I 0.000
ONIVA09G17720 Oryza nivara ONIVA09G17720 I 0.000
LPERR09G12780 Leersia perrieri LPERR09G12780 I 0.000
OGLUM09G17250 Oryza glumaepatula OGLUM09G17250 I 0.000
OGLUM08G23650 Oryza glumaepatula OGLUM08G23650 I 0.000
Traes_5DL_5DA6E1A09 Triticum aestivum Traes_5DL_5DA6E1A09 N 0.000
MLOC_40535 Hordeum vulgare MLOC_40535 N 0.000
BRADI3G41930 Brachypodium distachyon BRADI3G41930 N 0.000
Pavir.Fb02191 Panicum virgatum Pavir.Fb02191 N 0.000
Pavir.Fb00905 Panicum virgatum Pavir.Fb00905 N 0.000
Pavir.Fa00118 Panicum virgatum Pavir.Fa00118 N 0.000
BRADI3G41950 Brachypodium distachyon BRADI3G41950 N 0.000
BRADI4G35400 Brachypodium distachyon BRADI4G35400 N 0.000
Traes_5DL_F32936F9C Triticum aestivum Traes_5DL_F32936F9C N 0.000
Si015024m.g Setaria italica Si015024m.g N 0.000
Traes_5BL_E86F89671 Triticum aestivum Traes_5BL_E86F89671 N 0.000
Traes_5BL_C753673FD Triticum aestivum Traes_5BL_C753673FD N 0.000
GRMZM2G472671 Zea mays GRMZM2G472671 N 0.000
Sb07g025330 Sorghum bicolor Sb07g025330 N 0.000
Sb07g025340 Sorghum bicolor Sb07g025340 N 0.000
Si015343m.g Setaria italica Si015343m.g N 0.000
Si015072m.g Setaria italica Si015072m.g N 0.000
Si015026m.g Setaria italica Si015026m.g N 0.000