Traes_4DL_F064084A9 (Triticum aestivum)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 Traes_4DL_F064084A9 T224222_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATHB-15
M00864_2.00 		Arabidopsis thaliana
AATAATTACT
AGTAATTATT		 PBM
Franco-Zorrilla et al.(2014)
ICU4 		0.806 0.821
ATHB-15
M06899_2.00 		Arabidopsis thaliana
DWWDRTAATGATKAH
DTMATCATTAYHWWH		 Dap-seq
OMalley et al.(2016)
ATHB15_col_a 		0.806 0.821
ATHB-9
M06898_2.00 		Arabidopsis thaliana
DWWDRTAATGATKAH
DTMATCATTAYHWWH		 Dap-seq
OMalley et al.(2016)
PHV_col_a 		0.802 0.857
ATHB-9
M02682_2.00 		Arabidopsis thaliana
HNHHGTAATGATTRCDYBS
SVRHGYAATCATTACDDND		 SELEX
Mathelier et al.(2014)
MA0573.1 		0.802 0.857
ATHB-9
M10623_2.00 		Arabidopsis thaliana
HNHHGTAATGATTRCDYBS
SVRHGYAATCATTACDDND		 Transfac
Matys et al.(2006)
P$ATHB9_01 		0.802 0.857
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Traes_4DL_F064084A9.2 Homeodomain 26 85

Links

Other Homeodomain family TFs
Other Triticum aestivum TFs

331 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Sb07g025310 Sorghum bicolor Sb07g025310 I 0.000
ORGLA08G0221300 Oryza glaberrima ORGLA08G0221300 I 0.000
ORGLA09G0131400 Oryza glaberrima ORGLA09G0131400 I 0.000
ORUFI08G24840 Oryza rufipogon ORUFI08G24840 I 0.000
ORUFI09G17940 Oryza rufipogon ORUFI09G17940 I 0.000
OS08G0543700 Oryza sativa OS08G0543700 I 0.000
BGIOSGA026551 Oryza indica BGIOSGA026551 I 0.000
Sb02g030110 Sorghum bicolor Sb02g030110 I 0.000
Sb02g030120 Sorghum bicolor Sb02g030120 I 0.000
OS09G0519100 Oryza sativa OS09G0519100 I 0.000
Si015513m.g Setaria italica Si015513m.g I 0.000
Si031900m.g Setaria italica Si031900m.g I 0.000
Si032741m.g Setaria italica Si032741m.g I 0.000
Pavir.Ba01305 Panicum virgatum Pavir.Ba01305 I 0.000
Pavir.Ba01307 Panicum virgatum Pavir.Ba01307 I 0.000
Pavir.J01049 Panicum virgatum Pavir.J01049 I 0.000
Pavir.J40111 Panicum virgatum Pavir.J40111 I 0.000
ONIVA08G25370 Oryza nivara ONIVA08G25370 I 0.000
BGIOSGA029426 Oryza indica BGIOSGA029426 I 0.000
GRMZM2G013688 Zea mays GRMZM2G013688 I 0.000
GRMZM2G038479 Zea mays GRMZM2G038479 I 0.000
GRMZM2G107560 Zea mays GRMZM2G107560 I 0.000
LPERR03G22350 Leersia perrieri LPERR03G22350 I 0.000
LPERR08G19100 Leersia perrieri LPERR08G19100 I 0.000
OMERI08G17270 Oryza meridionalis OMERI08G17270 I 0.000
ONIVA09G17720 Oryza nivara ONIVA09G17720 I 0.000
LPERR09G12780 Leersia perrieri LPERR09G12780 I 0.000
OGLUM09G17250 Oryza glumaepatula OGLUM09G17250 I 0.000
OGLUM08G23650 Oryza glumaepatula OGLUM08G23650 I 0.000
Traes_5DL_5DA6E1A09 Triticum aestivum Traes_5DL_5DA6E1A09 N 0.000
MLOC_40535 Hordeum vulgare MLOC_40535 N 0.000
BRADI3G41930 Brachypodium distachyon BRADI3G41930 N 0.000
Pavir.Fb02191 Panicum virgatum Pavir.Fb02191 N 0.000
Pavir.Fb00905 Panicum virgatum Pavir.Fb00905 N 0.000
Pavir.Fa00118 Panicum virgatum Pavir.Fa00118 N 0.000
BRADI3G41950 Brachypodium distachyon BRADI3G41950 N 0.000
BRADI4G35400 Brachypodium distachyon BRADI4G35400 N 0.000
Traes_5DL_F32936F9C Triticum aestivum Traes_5DL_F32936F9C N 0.000
Si015024m.g Setaria italica Si015024m.g N 0.000
Traes_5BL_E86F89671 Triticum aestivum Traes_5BL_E86F89671 N 0.000
Traes_5BL_C753673FD Triticum aestivum Traes_5BL_C753673FD N 0.000
GRMZM2G472671 Zea mays GRMZM2G472671 N 0.000
Sb07g025330 Sorghum bicolor Sb07g025330 N 0.000
Sb07g025340 Sorghum bicolor Sb07g025340 N 0.000
Si015343m.g Setaria italica Si015343m.g N 0.000
Si015072m.g Setaria italica Si015072m.g N 0.000
Si015026m.g Setaria italica Si015026m.g N 0.000