CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
UCRNP2_7717
(
Neofusicoccum parvum
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
UCRNP2_7717
T224420_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Pbx1
M09213_2.00
Mus musculus
TGABTGRCRGV
BCYGYCAVTCA
Misc
Kulakovskiy et al.(2013)
PBX1_MOUSE.H11MO.0.A
0.599
0.261
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EOD45561
Homeodomain
49
94
RQKRRRTSPEDQKILEAEYQRNSKPDKTARLEIVKRVALGEKEVQV
Links
Other
Homeodomain
family TFs
Other
Neofusicoccum parvum
TFs
33 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACEP24519
Atta cephalotes
ACEP24519
N
GB49604
Apis mellifera
GB49604
N
NV25451
Nasonia vitripennis
NV25451
N
SINV14857
Solenopsis invicta
SINV14857
N
Hsal_07995--FBpp0079485_DROME
Harpegnathos saltator
Hsal_07995--FBpp0079485_DROME
N
CLEC002608
Cimex lectularius
CLEC002608
N
HHAL005942-PA
Halyomorpha halys
HHAL005942-PA
N