CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ca_11891
(
Cicer arietinum
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
Ca_11891
T225446_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ATML1
M02048_2.00
Arabidopsis thaliana
NNHNRHYRNN
NNYRDYNDNN
PBM
Weirauch et al.(2014)
pTH8203
0.630
0.772
PDF2
M06921_2.00
Arabidopsis thaliana
WNVGAATATTCYHTN
NADRGAATATTCBNW
Dap-seq
OMalley et al.(2016)
PDF2_col
0.630
0.772
ATML1
M10626_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ML1_01
0.630
0.772
PDF2
M10625_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$PDF2_01
0.630
0.772
HDG11
M02039_2.00
Arabidopsis thaliana
DCATTWAWKD
HMWTWAATGH
PBM
Weirauch et al.(2014)
pTH7664
0.624
0.632
HDG11
M06904_2.00
Arabidopsis thaliana
DCATTWAWTRH
DYAWTWAATGH
Dap-seq
OMalley et al.(2016)
EDT1_col
0.624
0.632
HDG9
M10628_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$HDG9_01
0.616
0.596
PK24181.1
M01252_2.00
Cannabis sativa
NNNNNNNHDH
DHDNNNNNNN
PBM
Lambert et al.(2019)
pTH11300
0.608
0.632
HDG1
M06917_2.00
Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH
Dap-seq
OMalley et al.(2016)
HDG1_col100_a
0.601
0.596
HDG1
M06918_2.00
Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH
Dap-seq
OMalley et al.(2016)
HDG1_colamp_a
0.601
0.596
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ca_11891
Homeodomain
53
109
KRSYRRHTQHQIQEMEVFFKHCPHPDDKQRKELGLQLGLEPLQVKFWFQNKRTQLKV
Links
Other
Homeodomain
family TFs
Other
Cicer arietinum
TFs
342 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PV05_01390
Exophiala xenobiotica
PV05_01390
N
TEQG_05876
Trichophyton equinum
TEQG_05876
N
SMAC_02857
Sordaria macrospora
SMAC_02857
N
SAPIO_CDS5487
Scedosporium apiospermum
SAPIO_CDS5487
N
S40288_06952
Stachybotrys chartarum
S40288_06952
N
S40285_08298
Stachybotrys chlorohalonata
S40285_08298
N
PVAR5_1404
Byssochlamys spectabilis
PVAR5_1404
N
PV11_04222
Exophiala sideris
PV11_04222
N
PV10_00681
Exophiala mesophila
PV10_00681
N
PV08_10670
Exophiala spinifera
PV08_10670
N
PV06_10373
Exophiala oligosperma
PV06_10373
N
TESG_06104
Trichophyton tonsurans
TESG_06104
N
PV04_05024
Capronia semiimmersa
PV04_05024
N
PODANS_1_11050
Podospora anserina
PODANS_1_11050
N
PMAA_054260
Talaromyces marneffei
PMAA_054260
N
PITC_020100
Penicillium italicum
PITC_020100
N
PEX1_048030
Penicillium expansum
PEX1_048030
N
PDIP_20560
Penicillium digitatum
PDIP_20560
N
PDE_02914
Penicillium oxalicum
PDE_02914
N
PCH_Pc16g09240
Penicillium rubens
PCH_Pc16g09240
N
PABG_01288
Paracoccidioides brasiliensis
PABG_01288
N
PAAG_11191
Paracoccidioides sp lutzii
PAAG_11191
N
Z519_11956
Cladophialophora bantiana
Z519_11956
N
TTAC_0000692101
Hydatigera taeniaeformis
TTAC_0000692101
N
TsM_000111500
Taenia solium
TsM_000111500
N
TASK_0000475801
Taenia asiatica
TASK_0000475801
N
PMAA_054260
Penicillium marneffei
PMAA_054260
N
Pc16g09240
Penicillium chrysogenum
Pc16g09240
N
estExt_Genewise1Plus.C_41039
Cryphonectria parasitica
estExt_Genewise1Plus.C_41039
N
NCU03126
Neurospora crassa
NCU03126
N
fgenesh1_pg.sca_1_chr1_3_0000978
Nectria haematococca
fgenesh1_pg.sca_1_chr1_3_0000978
N
estExt_fgeneshMC_pm.C_110016
Mucor circinelloides
estExt_fgeneshMC_pm.C_110016
N
estExt_fgenesh3_kg.C_70275
Neurospora discreta
estExt_fgenesh3_kg.C_70275
N
OCS_05805
Ophiocordyceps sinensis
OCS_05805
N
Z518_09874
Rhinocladiella mackenziei
Z518_09874
N
Z517_11784
Fonsecaea pedrosoi
Z517_11784
N
W97_06384
Coniosporium apollinis
W97_06384
N
VHEMI05033
Torrubiella hemipterigena
VHEMI05033
N
UV8b_1930
Ustilaginoidea virens
UV8b_1930
N
UREG_06618
Uncinocarpus reesii
UREG_06618
N
UCRPA7_6165
Togninia minima
UCRPA7_6165
N
U727_00434111271
Penicillium solitum
U727_00434111271
N
TSTA_018670
Talaromyces stipitatus
TSTA_018670
N
THITE_2065779
Thielavia terrestris
THITE_2065779
N
CADAFLAG00002314
Aspergillus flavus
CADAFLAG00002314
N
Cob_13319
Colletotrichum orbiculare
Cob_13319
N
CMQ_4658
Grosmannia clavigera
CMQ_4658
N
CHGG_00871
Chaetomium globosum
CHGG_00871
N
CH063_03229
Colletotrichum higginsianum
CH063_03229
N
CGGC5_8845
Colletotrichum gloeosporioides
CGGC5_8845
N
CFIO01_08353
Colletotrichum fioriniae
CFIO01_08353
N
CCM_00095
Cordyceps militaris
CCM_00095
N
NFIA_020200
Neosartorya fischeri
CADNFIAG00000998
N
ANIA_10103
Aspergillus nidulans
CADANIAG00002264
N
AFUA_1G04550
Aspergillus fumigatus
CADAFUAG00009157
N
CPC735_069450
Coccidioides posadasii
CPC735_069450
N
ACLA_030120
Aspergillus clavatus
CADACLAG00001678
N
BDDG_02106
Blastomyces dermatitidis
BDDG_02106
N
BBA_00521
Beauveria bassiana
BBA_00521
N
ARB_06161
Arthroderma benhamiae
ARB_06161
N
A1O9_00215
Exophiala aquamarina
A1O9_00215
N
A1O7_04095
Cladophialophora yegresii
A1O7_04095
N
A1O5_03082
Cladophialophora psammophila
A1O5_03082
N
A1O3_02901
Capronia epimyces
A1O3_02901
N
A1O1_00857
Capronia coronata
A1O1_00857
N
MCYG_02430
Microsporum canis
MCYG_02430
N
H102_03175
Trichophyton rubrum
H102_03175
N
NEUTE1DRAFT_150185
Neurospora tetrasperma
NEUTE1DRAFT_150185
N
NechaG75367
Fusarium solani
NechaG75367
N
MYCTH_2296180
Myceliophthora thermophila
MYCTH_2296180
N
MGYG_07436
Microsporum gypseum
MGYG_07436
N
MGG_01325
Magnaporthe oryzae
MGG_01325
N
MCYG_02430
Arthroderma otae
MCYG_02430
N
MAM_03379
Metarhizium album
MAM_03379
N
HMPREF1541_09174
Cyphellophora europaea
HMPREF1541_09174
N
HMPREF1120_06620
Exophiala dermatitidis
HMPREF1120_06620
N
H105_03193
Trichophyton soudanense
H105_03193
N
CIMG_04934
Coccidioides immitis
CIMG_04934
N
H101_01603
Trichophyton interdigitale
H101_01603
N
GLRG_00634
Colletotrichum graminicola
GLRG_00634
N
GGTG_07805
Gaeumannomyces graminis
GGTG_07805
N
G647_04603
Cladophialophora carrionii
G647_04603
N
EURHEDRAFT_413306
Aspergillus ruber
EURHEDRAFT_413306
N
EPUS_02925
Endocarpon pusillum
EPUS_02925
N
CTHT_0060550
Chaetomium thermophilum
CTHT_0060550
N
CSUB01_02897
Colletotrichum sublineola
CSUB01_02897
N
CPUR_00112
Claviceps purpurea
CPUR_00112
N