ENSBTAP00000049813-D1 (Bos grunniens)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 ENSBTAP00000049813-D1 T225896_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DUXA
M01247_2.00 		Homo sapiens
NTGATTRNN
NNYAATCAN		 PBM
Lambert et al.(2019)
pTH11226 		0.785 0.768
DUXA
M03244_2.00 		Homo sapiens
NHRAYBYAATCAN
NTGATTRVRTYDN		 SELEX
Jolma et al.(2013)
DUXA_1 		0.785 0.768
DUXA
M05402_2.00 		Homo sapiens
TRAYBYAATCA
TGATTRVRTYA		 SELEX
Yin et al.(2017)
DUXA_eDBD_HT-SELEX 		0.785 0.768
DUXA
M10756_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DUXA_02 		0.785 0.768
DUXA
M05403_2.00 		Homo sapiens
YRAYBYAATCA
TGATTRVRTYR		 SELEX
Yin et al.(2017)
DUXA_eDBD_Methyl-HT-SELEX 		0.785 0.768
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSBTAP00000049813-D1 Homeodomain 25 79
ENSBTAP00000049813-D1 Homeodomain 108 164

Links

Other Homeodomain family TFs
Other Bos grunniens TFs

40 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.J21810 Panicum virgatum Pavir.J21810 N