CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSMMUP00000010232
(
Macaca fascicularis
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
ENSMMUP00000010232
T225907_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
DUXA
M01247_2.00
Homo sapiens
NTGATTRNN
NNYAATCAN
PBM
Lambert et al.(2019)
pTH11226
0.841
0.929
DUXA
M03244_2.00
Homo sapiens
NHRAYBYAATCAN
NTGATTRVRTYDN
SELEX
Jolma et al.(2013)
DUXA_1
0.841
0.929
DUXA
M05402_2.00
Homo sapiens
TRAYBYAATCA
TGATTRVRTYA
SELEX
Yin et al.(2017)
DUXA_eDBD_HT-SELEX
0.841
0.929
DUXA
M10756_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DUXA_02
0.841
0.929
DUXA
M05403_2.00
Homo sapiens
YRAYBYAATCA
TGATTRVRTYR
SELEX
Yin et al.(2017)
DUXA_eDBD_Methyl-HT-SELEX
0.841
0.929
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMMUP00000010232
Homeodomain
7
63
RRSRTKFTEDQLKILIDTFNQKPYPGYATKQKLALEINTEESRIQIWFQNRRARQRF
ENSMMUP00000010232
Homeodomain
93
147
RRCRTTYSTSQLHTLIKAFVKNPYPGIDSREELAKEIGVPESRVQIWFQNRRSRL
Links
Other
Homeodomain
family TFs
Other
Macaca fascicularis
TFs
31 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aqu1.215662
Amphimedon queenslandica
Aqu1.215662
I
csin100106
Clonorchis sinensis
csin100106
I
ECPE_0000012501
Echinostoma caproni
ECPE_0000012501
I
SPER_0003658001
Spirometra erinaceieuropaei
SPER_0003658001
N
SSLN_0001232601
Schistocephalus solidus
SSLN_0001232601
N