Pm015136 (Prunus mume)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Pm015136 T226660_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HOS66
M02156_2.00 		Oryza sativa
NNNNDHNN
NNDHNNNN		 PBM
Weirauch et al.(2014)
pTH8332 		0.744 0.538
KNAT7
M01064_2.00 		Arabidopsis thaliana
TGACRKST
ASMYGTCA		 PBM
Sullivan et al.(2014)
pTH9798 		0.731 0.519
KNAT4
M01238_2.00 		Arabidopsis thaliana
NNGACNNNN
NNNNGTCNN		 PBM
Lambert et al.(2019)
pTH9968 		0.731 0.519
KNAT3
M02051_2.00 		Arabidopsis thaliana
NNNGACVBNN
NNVBGTCNNN		 PBM
Weirauch et al.(2014)
pTH7600 		0.731 0.500
Q5EVH4_OIKDI
M02227_2.00 		Oikopleura dioica
NTGACAKN
NMTGTCAN		 PBM
Weirauch et al.(2014)
pTH6041 		0.646 0.423
PK25034.1
M01254_2.00 		Cannabis sativa
NNTGACRKBN
NVMYGTCANN		 PBM
Lambert et al.(2019)
pTH11259 		0.637 0.654
MEIS3
M03093_2.00 		Homo sapiens
DTGACANN
NNTGTCAH		 SELEX
Jolma et al.(2013)
MEIS3_1 		0.621 0.404
MEIS3
M03094_2.00 		Homo sapiens
TGACAGSTGTCA
TGACASCTGTCA		 SELEX
Jolma et al.(2013)
MEIS3_2 		0.621 0.404
MEIS3
M04951_2.00 		Homo sapiens
TGWCABVTGWCA
TGWCABVTGWCA		 SELEX
Yin et al.(2017)
MEIS3_eDBD_HT-SELEX 		0.621 0.404
MEIS3
M04952_2.00 		Homo sapiens
YGWCABVTGWCR
YGWCABVTGWCR		 SELEX
Yin et al.(2017)
MEIS3_eDBD_Methyl-HT-SELEX 		0.621 0.404
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pm015136 Homeodomain 240 291

Links

Other Homeodomain family TFs
Other Prunus mume TFs

1129 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PGUG_04373 Candida guilliermondii PGUG_04373 N 0.000
CANTEDRAFT_115344 Candida tenuis CANTEDRAFT_115344 N 0.000
G210_2469 Candida maltosa G210_2469 N 0.000
GNLVRS01_PISO0E10256g Millerozyma farinosa GNLVRS01_PISO0E10256g N 0.000
HPODL_02493 Ogataea parapolymorpha HPODL_02493 N 0.000
PGUG_04373 Meyerozyma guilliermondii PGUG_04373 N 0.000
PICST_66620 Scheffersomyces stipitis PICST_66620 N 0.000
SPAPADRAFT_62218 Spathaspora passalidarum SPAPADRAFT_62218 N 0.000
estExt_fgenesh1_pg.C_chr_1.20168 Pichia stipitis estExt_fgenesh1_pg.C_chr_1.20168 N 0.000
SAKL0B05434g Lachancea kluyveri SAKL0B05434g N 0.000