CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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29671.m000294
(
Ricinus communis
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
29671.m000294
T226970_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MTR_2g038000
M02141_2.00
Medicago truncatula
NDNYWNNNNN
NNNNNWRNHN
PBM
Weirauch et al.(2014)
pTH6339
0.636
0.684
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
29671.m000294
Homeodomain
500
556
KRPLFRIPPSAVEKLRQVFAENELPSRTIKENLSKELGLEPGKVSKWFKNARYLALK
Links
Other
Homeodomain
family TFs
Other
Ricinus communis
TFs
33 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MYPOP
Dasypus novemcinctus
ENSDNOG00000044809
N
ENSMEUG00000005694
Macropus eugenii
ENSMEUG00000005694
N
MYPOP
Otolemur garnettii
ENSOGAG00000013500
N
MYPOP
Pteropus vampyrus
ENSPVAG00000001362
N
mypop
Xenopus tropicalis
XB-GENE-999497
N
mypop.L
Xenopus laevis
XB-GENE-999501
N