29876.m000245 (Ricinus communis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 29876.m000245 T226989_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WUS
M06905_2.00 		Arabidopsis thaliana
TRAWTGAWTGA
TCAWTCAWTYA		 Dap-seq
OMalley et al.(2016)
WUS1_col_a 		0.747 0.684
WUS
M06906_2.00 		Arabidopsis thaliana
TGAWTGAWTGW
WCAWTCAWTCA		 Dap-seq
OMalley et al.(2016)
WUS1_colamp_a 		0.747 0.684
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
29876.m000245 Homeodomain 20 81

Links

Other Homeodomain family TFs
Other Ricinus communis TFs

453 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
V565_004480 Rhizoctonia solani V565_004480 I
PLEOSDRAFT_1029614 Pleurotus ostreatus PLEOSDRAFT_1029614 N
M408DRAFT_326089 Serendipita vermifera M408DRAFT_326089 N
M413DRAFT_440930 Hebeloma cylindrosporum M413DRAFT_440930 N
Moror_1059 Moniliophthora roreri Moror_1059 N
PAXRUDRAFT_13206 Paxillus rubicundulus PAXRUDRAFT_13206 N
PHACADRAFT_249397 Phanerochaete carnosa PHACADRAFT_249397 N
PHLGIDRAFT_35648 Phlebiopsis gigantea PHLGIDRAFT_35648 N
PIIN_03370 Piriformospora indica PIIN_03370 N
PILCRDRAFT_811082 Piloderma croceum PILCRDRAFT_811082 N
PISMIDRAFT_670921 Pisolithus microcarpus PISMIDRAFT_670921 N
M408DRAFT_220715 Serendipita vermifera M408DRAFT_220715 N
SCHCODRAFT_47142 Schizophyllum commune SCHCODRAFT_47142 N
SCLCIDRAFT_1210054 Scleroderma citrinum SCLCIDRAFT_1210054 N
SERLA73DRAFT_177169 Serpula lacrymans SERLA73DRAFT_177169 N
V565_033130 Rhizoctonia solani V565_033130 N
V565_035960 Rhizoctonia solani V565_035960 N
fgenesh1_pg.C_scaffold_2000701 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_2000701 N
e_gw1.4.2249.1 Heterobasidion annosum e_gw1.4.2249.1 N
GALMADRAFT_23139 Galerina marginata GALMADRAFT_23139 N
BN946_scf184908.g73 Trametes cinnabarina BN946_scf184908.g73 N
BOTBODRAFT_26713 Botryobasidium botryosum BOTBODRAFT_26713 N
BOTBODRAFT_26714 Botryobasidium botryosum BOTBODRAFT_26714 N
BOTBODRAFT_72561 Botryobasidium botryosum BOTBODRAFT_72561 N
CC1G_00050 Coprinopsis cinerea CC1G_00050 N
CERSUDRAFT_111398 Ceriporiopsis subvermispora CERSUDRAFT_111398 N
CY34DRAFT_808328 Suillus luteus CY34DRAFT_808328 N
FIBRA_01455 Fibroporia radiculosa FIBRA_01455 N
FOMPIDRAFT_138732 Fomitopsis pinicola FOMPIDRAFT_138732 N
AGABI2DRAFT_191713 Agaricus bisporus AGABI2DRAFT_191713 N
GLOTRDRAFT_55344 Gloeophyllum trabeum GLOTRDRAFT_55344 N
HETIRDRAFT_240562 Heterobasidion irregulare HETIRDRAFT_240562 N
JAAARDRAFT_28293 Jaapia argillacea JAAARDRAFT_28293 N
K443DRAFT_672537 Laccaria amethystina K443DRAFT_672537 N
M378DRAFT_8932 Amanita muscaria M378DRAFT_8932 N
M404DRAFT_92668 Pisolithus tinctorius M404DRAFT_92668 N
M407DRAFT_127438 Tulasnella calospora M407DRAFT_127438 N
M407DRAFT_91983 Tulasnella calospora M407DRAFT_91983 N