CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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e_gw1.55.69.1
(
Nectria haematococca
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
e_gw1.55.69.1
T227266_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FGRRES_16926_M
M02133_2.00
Fusarium graminearum
NNKACWNN
NNWGTMNN
PBM
Weirauch et al.(2014)
pTH6267
0.759
0.769
FGRRES_17150
M02134_2.00
Fusarium graminearum
NWYKACAWVN
NBWTGTMRWN
PBM
Weirauch et al.(2014)
pTH5833
0.602
0.596
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
e_gw1.55.69.1
Homeodomain
114
168
GHRFTRESARVLKRWFSEHSEHPYPSEEEKTMLQCQTGLSRTQVTNWLANARRRR
Links
Other
Homeodomain
family TFs
Other
Nectria haematococca
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
FGRRES_16926_M
Fusarium graminearum
FGRRES_16926_M
D
0.759
FGRRES_17150
Fusarium graminearum
FGRRES_17150
D
0.602
FFUJ_14508
Fusarium fujikuroi
FFUJ_14508
I
0.799
FOXG_03765
Fusarium oxysporum
FOXG_03765
I
0.799
FOXG_08975
Fusarium oxysporum
FOXG_08975
I
0.601
FPSE_04442
Fusarium pseudograminearum
FPSE_04442
I
0.784
FVEG_06568
Fusarium verticillioides
FVEG_06568
I
0.601
NechaG54513
Fusarium solani
NechaG54513
I
0.867