CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
fgenesh1_pg.scaffold_31000121
(
Physcomitrella patens
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
fgenesh1_pg.scaffold_31000121
T227483_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pg.scaffold_31000121
Homeodomain
557
617
KRTRTRISLEQREKLNAFAEKAGWTVVGQRKETIDATCQYIGIEPKTLKYWIHNSKQKWKR
Links
Other
Homeodomain
family TFs
Other
Physcomitrella patens
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SELMODRAFT_445334
Selaginella moellendorffii
SELMODRAFT_445334
N
0.654
gw1.259.9.1
Physcomitrella patens
gw1.259.9.1
N
0.755