CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gw1.259.9.1
(
Physcomitrella patens
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
gw1.259.9.1
T227618_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
gw1.259.9.1
Homeodomain
108
166
KRKRTQLTDEQREKMKSYAEHAGWTIVGQRKENIAAACKDIGVTPKTLKYWIHNAKQKL
Links
Other
Homeodomain
family TFs
Other
Physcomitrella patens
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SELMODRAFT_445334
Selaginella moellendorffii
SELMODRAFT_445334
N
0.644
fgenesh1_pg.scaffold_31000121
Physcomitrella patens
fgenesh1_pg.scaffold_31000121
N
0.755