Aquca_003_00184 (Aquilegia coerulea)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Aquca_003_00184 T228019_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATH1
M10627_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATH1_01 		0.783 0.667
Q5EVH4_OIKDI
M02227_2.00 		Oikopleura dioica
NTGACAKN
NMTGTCAN		 PBM
Weirauch et al.(2014)
pTH6041 		0.638 0.562
MEIS3
M03093_2.00 		Homo sapiens
DTGACANN
NNTGTCAH		 SELEX
Jolma et al.(2013)
MEIS3_1 		0.606 0.417
MEIS3
M03094_2.00 		Homo sapiens
TGACAGSTGTCA
TGACASCTGTCA		 SELEX
Jolma et al.(2013)
MEIS3_2 		0.606 0.417
MEIS3
M04951_2.00 		Homo sapiens
TGWCABVTGWCA
TGWCABVTGWCA		 SELEX
Yin et al.(2017)
MEIS3_eDBD_HT-SELEX 		0.606 0.417
MEIS3
M04952_2.00 		Homo sapiens
YGWCABVTGWCR
YGWCABVTGWCR		 SELEX
Yin et al.(2017)
MEIS3_eDBD_Methyl-HT-SELEX 		0.606 0.417
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Aquca_003_00184.1 Homeodomain 410 460

Links

Other Homeodomain family TFs
Other Aquilegia coerulea TFs

1004 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F443_16825 Phytophthora parasitica F443_16825 N
maker-pir_contig_1091-fgenesh-gene-0.1 Pythium irregulare maker-pir_contig_1091-fgenesh-gene-0.1 N
maker-pir_contig_1608-fgenesh-gene-0.0 Pythium irregulare maker-pir_contig_1608-fgenesh-gene-0.0 N
maker-piw_contig_643-fgenesh-gene-0.4 Pythium iwayamai maker-piw_contig_643-fgenesh-gene-0.4 N
maker-pve_contig_640-fgenesh-gene-0.0 Pythium vexans maker-pve_contig_640-fgenesh-gene-0.0 N
Phyra84542 Phytophthora ramorum Phyra84542 N
Physo142771 Phytophthora sojae Physo142771 N
Physo143987 Phytophthora sojae Physo143987 N
PITG_17567 Phytophthora infestans PITG_17567 N
PYU1_G006426 Pythium ultimum PYU1_G006426 N
PYU1_G006431 Pythium ultimum PYU1_G006431 N