Cagra.0268s0009 (Capsella grandiflora)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Cagra.0268s0009 T228179_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MTR_2g038000
M02141_2.00 		Medicago truncatula
NDNYWNNNNN
NNNNNWRNHN		 PBM
Weirauch et al.(2014)
pTH6339 		0.673 0.709
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.0268s0009.1.p Homeodomain 454 508

Links

Other Homeodomain family TFs
Other Capsella grandiflora TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
DEHA2G12628g Debaryomyces hansenii DEHA2G12628g N
e_gww1.6.1.89.1 Pichia stipitis e_gww1.6.1.89.1 N
YALI0_C18645g Yarrowia lipolytica YALI0_C18645g N
SPAPADRAFT_145658 Spathaspora passalidarum SPAPADRAFT_145658 N
PGUG_04328 Meyerozyma guilliermondii PGUG_04328 N
OIDMADRAFT_134351 Oidiodendron maius OIDMADRAFT_134351 N
LELG_01533 Lodderomyces elongisporus LELG_01533 N
KLLA0_A01804g Kluyveromyces lactis KLLA0_A01804g N
GNLVRS01_PISO0F10697g Millerozyma farinosa GNLVRS01_PISO0F10697g N
GNLVRS01_PISO0E09332g Millerozyma farinosa GNLVRS01_PISO0E09332g N
G210_2857 Candida maltosa G210_2857 N
EV44_g5837 Erysiphe necator EV44_g5837 N
CPAG_00950 Candida parapsilosis CPAG_00950 N
CTRG_04783 Candida tropicalis CTRG_04783 N
CORT_0B09660 Candida orthopsilosis CORT_0B09660 N
CNI01500 Cryptococcus neoformans CNI01500 N
CD36_03000 Candida dubliniensis CD36_03000 N
CaO19.3012 Candida albicans CaO19.3012 N
CaO19.10530 Candida albicans CaO19.10530 N
CANTEDRAFT_111614 Candida tenuis CANTEDRAFT_111614 N
CADANGAG00008701 Aspergillus niger CADANGAG00008701 N
BN7_5384 Wickerhamomyces ciferrii BN7_5384 N
BGHDH14_bgh03978 Blumeria graminis BGHDH14_bgh03978 N
PGUG_04328 Candida guilliermondii PGUG_04328 N