Eucgr.D02223 (Eucalyptus grandis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Eucgr.D02223 T228464_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK24181.1
M01252_2.00 		Cannabis sativa
NNNNNNNHDH
DHDNNNNNNN		 PBM
Lambert et al.(2019)
pTH11300 		0.857 0.807
ATML1
M02048_2.00 		Arabidopsis thaliana
NNHNRHYRNN
NNYRDYNDNN		 PBM
Weirauch et al.(2014)
pTH8203 		0.850 0.807
ATML1
M10626_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ML1_01 		0.850 0.807
HDG11
M02039_2.00 		Arabidopsis thaliana
DCATTWAWKD
HMWTWAATGH		 PBM
Weirauch et al.(2014)
pTH7664 		0.841 0.789
HDG11
M06904_2.00 		Arabidopsis thaliana
DCATTWAWTRH
DYAWTWAATGH		 Dap-seq
OMalley et al.(2016)
EDT1_col 		0.841 0.789
PDF2
M06921_2.00 		Arabidopsis thaliana
WNVGAATATTCYHTN
NADRGAATATTCBNW		 Dap-seq
OMalley et al.(2016)
PDF2_col 		0.839 0.789
PDF2
M10625_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PDF2_01 		0.839 0.789
HDG1
M06917_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
HDG1_col100_a 		0.812 0.737
HDG1
M06918_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
HDG1_colamp_a 		0.812 0.737
ANL2
M02046_2.00 		Arabidopsis thaliana
NCATTWATKNN
NNMATWAATGN		 PBM
Weirauch et al.(2014)
pTH8244 		0.797 0.754
ANL2
M06919_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
ANL2_col_a 		0.797 0.754
ANL2
M06920_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
ANL2_colamp_a 		0.797 0.754
HDG9
M10628_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$HDG9_01 		0.791 0.649
HDG7
M06931_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
HDG7_col_a 		0.754 0.649
HDG7
M10629_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$HDG7_01 		0.754 0.649
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.D02223.1 Homeodomain 102 158

Links

Other Homeodomain family TFs
Other Eucalyptus grandis TFs

617 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSCPOG00000000188 Cavia porcellus ENSCPOG00000000188 I
KLF17 Vicugna pacos ENSVPAG00000004627 I
KLF17 Tursiops truncatus ENSTTRG00000013114 I
Klf17 Mus musculus ENSMUSG00000048626 N
Myotis_brandtii_KLF17_10008301 Myotis brandtii Myotis_brandtii_KLF17_10008301 N
Myotis_brandtii_KLF17_10003752 Myotis brandtii Myotis_brandtii_KLF17_10003752 N
ENSBTAP00000036194-D2 Bos grunniens ENSBTAP00000036194-D2 N
KLF17 Pteropus vampyrus ENSPVAG00000015329 N
KLF17 Oryctolagus cuniculus ENSOCUG00000003171 N
ENSOARG00000000759 Ovis aries ENSOARG00000000759 N
ENSAMEG00000014011 Ailuropoda melanoleuca ENSAMEG00000014011 N
ENSMLUG00000000160 Myotis lucifugus ENSMLUG00000000160 N
KLF17 Felis catus ENSFCAG00000022786 N
KLF17 Equus caballus ENSECAG00000002073 N
KLF17 Choloepus hoffmanni ENSCHOG00000010846 N
KLF17 Canis familiaris ENSCAFG00000004819 N
ENSBTAG00000047871 Bos taurus ENSBTAG00000047871 N