Eucgr.G01703 (Eucalyptus grandis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Eucgr.G01703 T228481_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATH1
M10627_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATH1_01 		0.843 0.755
Q5EVH4_OIKDI
M02227_2.00 		Oikopleura dioica
NTGACAKN
NMTGTCAN		 PBM
Weirauch et al.(2014)
pTH6041 		0.626 0.551
MEIS3
M03093_2.00 		Homo sapiens
DTGACANN
NNTGTCAH		 SELEX
Jolma et al.(2013)
MEIS3_1 		0.602 0.429
MEIS3
M03094_2.00 		Homo sapiens
TGACAGSTGTCA
TGACASCTGTCA		 SELEX
Jolma et al.(2013)
MEIS3_2 		0.602 0.429
MEIS3
M04951_2.00 		Homo sapiens
TGWCABVTGWCA
TGWCABVTGWCA		 SELEX
Yin et al.(2017)
MEIS3_eDBD_HT-SELEX 		0.602 0.429
MEIS3
M04952_2.00 		Homo sapiens
YGWCABVTGWCR
YGWCABVTGWCR		 SELEX
Yin et al.(2017)
MEIS3_eDBD_Methyl-HT-SELEX 		0.602 0.429
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.G01703.1 Homeodomain 394 445

Links

Other Homeodomain family TFs
Other Eucalyptus grandis TFs

1012 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
HCOI01500700 Haemonchus contortus HCOI01500700 N 0.000
TCNE_0001717001 Toxocara canis TCNE_0001717001 N 0.000
TCLT_0000794601 Thelazia callipaeda TCLT_0000794601 N 0.000
PEQ_0000179401 Parascaris equorum PEQ_0000179401 N 0.000
OFLC_0001133401 Onchocerca flexuosa OFLC_0001133401 N 0.000
OESDEN_21729 Oesophagostomum dentatum OESDEN_21729 N 0.000
nOo.2.0.1.g02446 Onchocerca ochengi nOo.2.0.1.g02446 N 0.000
nLs.2.1.2.g05187 Litomosoides sigmodontis nLs.2.1.2.g05187 N 0.000
nDi.2.2.2.g06500 Dirofilaria immitis nDi.2.2.2.g06500 N 0.000
nAv.1.0.1.g04153 Acanthocheilonema viteae nAv.1.0.1.g04153 N 0.000
HPBE_0000914901 Heligmosomoides bakeri HPBE_0000914901 N 0.000
WUBG_01220 Wuchereria bancrofti WUBG_01220 N 0.000
HCOI00019900 Haemonchus contortus HCOI00019900 N 0.000
DME_0000078101 Dracunculus medinensis DME_0000078101 N 0.000
CGOC_0000383801 Cylicostephanus goldi CGOC_0000383801 N 0.000
BTMF_0000251301 Brugia timori BTMF_0000251301 N 0.000
ASU_07762 Ascaris suum ASU_07762 N 0.000
ANCCAN_03211 Ancylostoma caninum ANCCAN_03211 N 0.000
WBGene00243099 Onchocerca volvulus WBGene00243099 N 0.000
LOAG_18045 Loa loa LOAG_18045 N 0.000
Bm7270 Brugia malayi Bm7270 N 0.000