evm.TU.supercontig_254.5 (Carica papaya)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 evm.TU.supercontig_254.5 T228546_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
KNAT7
M01064_2.00 		Arabidopsis thaliana
TGACRKST
ASMYGTCA		 PBM
Sullivan et al.(2014)
pTH9798 		0.727 0.690
KNAT4
M01238_2.00 		Arabidopsis thaliana
NNGACNNNN
NNNNGTCNN		 PBM
Lambert et al.(2019)
pTH9968 		0.723 0.643
KNAT3
M02051_2.00 		Arabidopsis thaliana
NNNGACVBNN
NNVBGTCNNN		 PBM
Weirauch et al.(2014)
pTH7600 		0.723 0.643
HOS66
M02156_2.00 		Oryza sativa
NNNNDHNN
NNDHNNNN		 PBM
Weirauch et al.(2014)
pTH8332 		0.710 0.667
MEIS3
M03093_2.00 		Homo sapiens
DTGACANN
NNTGTCAH		 SELEX
Jolma et al.(2013)
MEIS3_1 		0.697 0.452
MEIS3
M03094_2.00 		Homo sapiens
TGACAGSTGTCA
TGACASCTGTCA		 SELEX
Jolma et al.(2013)
MEIS3_2 		0.697 0.452
MEIS3
M04951_2.00 		Homo sapiens
TGWCABVTGWCA
TGWCABVTGWCA		 SELEX
Yin et al.(2017)
MEIS3_eDBD_HT-SELEX 		0.697 0.452
MEIS3
M04952_2.00 		Homo sapiens
YGWCABVTGWCR
YGWCABVTGWCR		 SELEX
Yin et al.(2017)
MEIS3_eDBD_Methyl-HT-SELEX 		0.697 0.452
Q5EVH4_OIKDI
M02227_2.00 		Oikopleura dioica
NTGACAKN
NMTGTCAN		 PBM
Weirauch et al.(2014)
pTH6041 		0.634 0.476
PK25034.1
M01254_2.00 		Cannabis sativa
NNTGACRKBN
NVMYGTCANN		 PBM
Lambert et al.(2019)
pTH11259 		0.632 0.786
ATH1
M10627_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATH1_01 		0.607 0.452
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_254.5 Homeodomain 105 146

Links

Other Homeodomain family TFs
Other Carica papaya TFs

1238 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZIC2 Homo sapiens ENSG00000043355 D 0.000
ZIC5 Homo sapiens ENSG00000139800 D 0.000
ZIC1 Homo sapiens ENSG00000152977 D 0.000
ZIC3 Homo sapiens ENSG00000156925 D 0.000
ZIC4 Homo sapiens ENSG00000174963 D 0.000
Zic1 Mus musculus ENSMUSG00000032368 D 0.000
Zic2 Mus musculus ENSMUSG00000061524 D 0.000
Zic3 Mus musculus ENSMUSG00000067860 D 0.000
CapteG160442 Capitella teleta CapteG160442 I 0.000
ENSACAG00000003681 Anolis carolinensis ENSACAG00000003681 I 0.000
ZIC1 Anolis carolinensis ENSACAG00000006947 I 0.000
ENSAMEG00000002144 Ailuropoda melanoleuca ENSAMEG00000002144 I 0.000
ENSAMEG00000002149 Ailuropoda melanoleuca ENSAMEG00000002149 I 0.000
ENSAMEG00000002684 Ailuropoda melanoleuca ENSAMEG00000002684 I 0.000
ENSAMEG00000004500 Ailuropoda melanoleuca ENSAMEG00000004500 I 0.000
ENSAMEG00000004503 Ailuropoda melanoleuca ENSAMEG00000004503 I 0.000
ENSAMXG00000002320 Astyanax mexicanus ENSAMXG00000002320 I 0.000
ENSAMXG00000002323 Astyanax mexicanus ENSAMXG00000002323 I 0.000
ENSAMXG00000010931 Astyanax mexicanus ENSAMXG00000010931 I 0.000
ENSAMXG00000010941 Astyanax mexicanus ENSAMXG00000010941 I 0.000
ENSAMXG00000012325 Astyanax mexicanus ENSAMXG00000012325 I 0.000
ENSAPLG00000002960 Anas platyrhynchos ENSAPLG00000002960 I 0.000
ENSAPLG00000003027 Anas platyrhynchos ENSAPLG00000003027 I 0.000
ENSAPLG00000010556 Anas platyrhynchos ENSAPLG00000010556 I 0.000
ZIC4 Bos taurus ENSBTAG00000014749 I 0.000
ZIC1 Bos taurus ENSBTAG00000014751 I 0.000
ZIC3 Bos taurus ENSBTAG00000021413 I 0.000
ZIC2 Bos taurus ENSBTAG00000025246 I 0.000
ZIC5 Canis familiaris ENSCAFG00000005834 I 0.000
ZIC2 Canis familiaris ENSCAFG00000005835 I 0.000
ZIC4 Canis familiaris ENSCAFG00000008194 I 0.000
ZIC3 Canis familiaris ENSCAFG00000018979 I 0.000
ZIC1 Callithrix jacchus ENSCJAG00000001524 I 0.000
ZIC3 Callithrix jacchus ENSCJAG00000013792 I 0.000
ENSCJAG00000020987 Callithrix jacchus ENSCJAG00000020987 I 0.000
ZIC2 Callithrix jacchus ENSCJAG00000020988 I 0.000
ENSCPOG00000002374 Cavia porcellus ENSCPOG00000002374 I 0.000
ZIC4 Cavia porcellus ENSCPOG00000010981 I 0.000
ZIC2 Cavia porcellus ENSCPOG00000026926 I 0.000
ENSCSAG00000007453 Chlorocebus sabaeus ENSCSAG00000007453 I 0.000
ENSCSAG00000011405 Chlorocebus sabaeus ENSCSAG00000011405 I 0.000
ENSCSAG00000011409 Chlorocebus sabaeus ENSCSAG00000011409 I 0.000
ENSCSAG00000017494 Chlorocebus sabaeus ENSCSAG00000017494 I 0.000
ENSCSAG00000017495 Chlorocebus sabaeus ENSCSAG00000017495 I 0.000
zic2a Danio rerio ENSDARG00000015554 I 0.000
zic1 Danio rerio ENSDARG00000015567 I 0.000
zic5 Danio rerio ENSDARG00000016022 I 0.000
zic4 Danio rerio ENSDARG00000031307 I 0.000
zic2b Danio rerio ENSDARG00000037178 I 0.000
zic3 Danio rerio ENSDARG00000071497 I 0.000
ZIC4 Dasypus novemcinctus ENSDNOG00000001881 I 0.000
ZIC3 Dasypus novemcinctus ENSDNOG00000006192 I 0.000
ZIC2 Dasypus novemcinctus ENSDNOG00000043170 I 0.000
ZIC5 Dasypus novemcinctus ENSDNOG00000046390 I 0.000
ZIC1 Dasypus novemcinctus ENSDNOG00000047101 I 0.000
ENSDORG00000014318 Dipodomys ordii ENSDORG00000014318 I 0.000
ZIC3 Equus caballus ENSECAG00000013318 I 0.000
ZIC2 Equus caballus ENSECAG00000018593 I 0.000
ZIC4 Equus caballus ENSECAG00000020070 I 0.000
ZIC1 Equus caballus ENSECAG00000020355 I 0.000
ZIC4 Erinaceus europaeus ENSEEUG00000000251 I 0.000
ZIC5 Erinaceus europaeus ENSEEUG00000002965 I 0.000
ZIC2 Erinaceus europaeus ENSEEUG00000013747 I 0.000
ZIC2 Echinops telfairi ENSETEG00000007329 I 0.000
ZIC3 Echinops telfairi ENSETEG00000018846 I 0.000
ENSFALG00000003772 Ficedula albicollis ENSFALG00000003772 I 0.000
ENSFALG00000004344 Ficedula albicollis ENSFALG00000004344 I 0.000
ENSFALG00000007091 Ficedula albicollis ENSFALG00000007091 I 0.000
ENSFALG00000007094 Ficedula albicollis ENSFALG00000007094 I 0.000
ZIC4 Felis catus ENSFCAG00000007059 I 0.000
ZIC1 Felis catus ENSFCAG00000007061 I 0.000
ZIC3 Felis catus ENSFCAG00000025684 I 0.000
ENSFCAG00000030117 Felis catus ENSFCAG00000030117 I 0.000
zic2b Gasterosteus aculeatus ENSGACG00000001901 I 0.000
zic1 Gasterosteus aculeatus ENSGACG00000003678 I 0.000
zic4 Gasterosteus aculeatus ENSGACG00000003685 I 0.000
zic3 Gasterosteus aculeatus ENSGACG00000017212 I 0.000
ENSGALG00000006497 Gallus gallus ENSGALG00000006497 I 0.000
ENSGALG00000006810 Gallus gallus ENSGALG00000006810 I 0.000
ENSGALG00000006811 Gallus gallus ENSGALG00000006811 I 0.000
ZIC1 Gorilla gorilla ENSGGOG00000001101 I 0.000
ZIC2 Gorilla gorilla ENSGGOG00000006512 I 0.000
ZIC4 Gorilla gorilla ENSGGOG00000008924 I 0.000
ZIC3 Gorilla gorilla ENSGGOG00000011914 I 0.000
ZIC5 Gorilla gorilla ENSGGOG00000022385 I 0.000
ENSGMOG00000001788 Gadus morhua ENSGMOG00000001788 I 0.000
ENSGMOG00000001798 Gadus morhua ENSGMOG00000001798 I 0.000
ENSGMOG00000004438 Gadus morhua ENSGMOG00000004438 I 0.000
ENSGMOG00000019585 Gadus morhua ENSGMOG00000019585 I 0.000
ENSLACG00000008525 Latimeria chalumnae ENSLACG00000008525 I 0.000
ENSLACG00000014597 Latimeria chalumnae ENSLACG00000014597 I 0.000
ZIC3 Loxodonta africana ENSLAFG00000007048 I 0.000
ZIC2 Loxodonta africana ENSLAFG00000008431 I 0.000
ZIC1 Loxodonta africana ENSLAFG00000030632 I 0.000
ENSLOCG00000003077 Lepisosteus oculatus ENSLOCG00000003077 I 0.000
ENSLOCG00000003087 Lepisosteus oculatus ENSLOCG00000003087 I 0.000
ENSLOCG00000007706 Lepisosteus oculatus ENSLOCG00000007706 I 0.000
ENSLOCG00000007717 Lepisosteus oculatus ENSLOCG00000007717 I 0.000
ENSLOCG00000015155 Lepisosteus oculatus ENSLOCG00000015155 I 0.000
ENSMEUG00000004592 Macropus eugenii ENSMEUG00000004592 I 0.000
ENSMEUG00000009632 Macropus eugenii ENSMEUG00000009632 I 0.000
ENSMEUG00000014290 Macropus eugenii ENSMEUG00000014290 I 0.000
ENSMICG00000010339 Microcebus murinus ENSMICG00000010339 I 0.000
ZIC4 Microcebus murinus ENSMICG00000014391 I 0.000
ZIC1 Microcebus murinus ENSMICG00000014401 I 0.000
ZIC2 Microcebus murinus ENSMICG00000015310 I 0.000
ZIC2 Myotis lucifugus ENSMLUG00000003412 I 0.000
ZIC3 Myotis lucifugus ENSMLUG00000011691 I 0.000
ZIC4 Macaca mulatta ENSMMUG00000004741 I 0.000
ZIC1 Macaca mulatta ENSMMUG00000004742 I 0.000
ZIC5 Macaca mulatta ENSMMUG00000014821 I 0.000
ZIC2 Macaca mulatta ENSMMUG00000014822 I 0.000
ZIC2 Monodelphis domestica ENSMODG00000007718 I 0.000
ZIC5 Monodelphis domestica ENSMODG00000007733 I 0.000
ZIC3 Monodelphis domestica ENSMODG00000014029 I 0.000
ENSMODG00000021250 Monodelphis domestica ENSMODG00000021250 I 0.000
ENSMPUG00000001786 Mustela putorius furo ENSMPUG00000001786 I 0.000
ENSMPUG00000011375 Mustela putorius furo ENSMPUG00000011375 I 0.000
ENSMPUG00000011764 Mustela putorius furo ENSMPUG00000011764 I 0.000
ENSMPUG00000011767 Mustela putorius furo ENSMPUG00000011767 I 0.000
Zic4 Mus musculus ENSMUSG00000036972 I 0.000
ENSNLEG00000002375 Nomascus leucogenys ENSNLEG00000002375 I 0.000
ENSNLEG00000002407 Nomascus leucogenys ENSNLEG00000002407 I 0.000
ENSNLEG00000003005 Nomascus leucogenys ENSNLEG00000003005 I 0.000
ENSNLEG00000007807 Nomascus leucogenys ENSNLEG00000007807 I 0.000
ENSNLEG00000007808 Nomascus leucogenys ENSNLEG00000007808 I 0.000
ZIC4 Ornithorhynchus anatinus ENSOANG00000007364 I 0.000
ENSOARG00000004385 Ovis aries ENSOARG00000004385 I 0.000
ENSOARG00000005434 Ovis aries ENSOARG00000005434 I 0.000
ENSOARG00000005467 Ovis aries ENSOARG00000005467 I 0.000
ENSOARG00000010774 Ovis aries ENSOARG00000010774 I 0.000
ZIC3 Oryctolagus cuniculus ENSOCUG00000009358 I 0.000
ZIC4 Oryctolagus cuniculus ENSOCUG00000010959 I 0.000
ZIC4 Otolemur garnettii ENSOGAG00000007463 I 0.000
ZIC1 Otolemur garnettii ENSOGAG00000007465 I 0.000
ZIC3 Otolemur garnettii ENSOGAG00000011700 I 0.000
ZIC2 Otolemur garnettii ENSOGAG00000025901 I 0.000
ENSONIG00000002716 Oreochromis niloticus ENSONIG00000002716 I 0.000
ENSONIG00000005875 Oreochromis niloticus ENSONIG00000005875 I 0.000
ENSONIG00000005878 Oreochromis niloticus ENSONIG00000005878 I 0.000
ENSONIG00000006787 Oreochromis niloticus ENSONIG00000006787 I 0.000
ENSONIG00000006788 Oreochromis niloticus ENSONIG00000006788 I 0.000
zic3 Oryzias latipes ENSORLG00000001654 I 0.000
zic1 Oryzias latipes ENSORLG00000010050 I 0.000
zic4 Oryzias latipes ENSORLG00000010055 I 0.000
zic5 Oryzias latipes ENSORLG00000011124 I 0.000
ENSPANG00000005804 Papio anubis ENSPANG00000005804 I 0.000
ENSPANG00000007601 Papio anubis ENSPANG00000007601 I 0.000
ENSPANG00000011357 Papio anubis ENSPANG00000011357 I 0.000
ENSPANG00000018055 Papio anubis ENSPANG00000018055 I 0.000
ENSPANG00000024745 Papio anubis ENSPANG00000024745 I 0.000
ZIC4 Procavia capensis ENSPCAG00000008210 I 0.000
ZIC5 Procavia capensis ENSPCAG00000011845 I 0.000
ENSPFOG00000012158 Poecilia formosa ENSPFOG00000012158 I 0.000
ENSPFOG00000012173 Poecilia formosa ENSPFOG00000012173 I 0.000
ENSPFOG00000012982 Poecilia formosa ENSPFOG00000012982 I 0.000
ENSPFOG00000013981 Poecilia formosa ENSPFOG00000013981 I 0.000
ENSPFOG00000014007 Poecilia formosa ENSPFOG00000014007 I 0.000
ENSPPYG00000005472 Pongo abelii ENSPPYG00000005472 I 0.000
ENSPPYG00000014188 Pongo abelii ENSPPYG00000014188 I 0.000
ENSPPYG00000020775 Pongo abelii ENSPPYG00000020775 I 0.000
ENSPSIG00000004881 Pelodiscus sinensis ENSPSIG00000004881 I 0.000
ENSPSIG00000005002 Pelodiscus sinensis ENSPSIG00000005002 I 0.000
ENSPSIG00000009089 Pelodiscus sinensis ENSPSIG00000009089 I 0.000
ENSPSIG00000009132 Pelodiscus sinensis ENSPSIG00000009132 I 0.000
ENSPSIG00000011896 Pelodiscus sinensis ENSPSIG00000011896 I 0.000
ZIC2 Pan troglodytes ENSPTRG00000006000 I 0.000
ZIC4 Pan troglodytes ENSPTRG00000015500 I 0.000
ZIC1 Pan troglodytes ENSPTRG00000015501 I 0.000
ENSPTRG00000034285 Pan troglodytes ENSPTRG00000034285 I 0.000
ZIC4 Pteropus vampyrus ENSPVAG00000003870 I 0.000
ZIC3 Pteropus vampyrus ENSPVAG00000011652 I 0.000
Zic3 Rattus norvegicus ENSRNOG00000000861 I 0.000
Zic5 Rattus norvegicus ENSRNOG00000014358 I 0.000
Zic1 Rattus norvegicus ENSRNOG00000014644 I 0.000
Zic4 Rattus norvegicus ENSRNOG00000014871 I 0.000
Zic2 Rattus norvegicus ENSRNOG00000054879 I 0.000
ZIC3 Sorex araneus ENSSARG00000012492 I 0.000
ENSSHAG00000003850 Sarcophilus harrisii ENSSHAG00000003850 I 0.000
ENSSHAG00000015091 Sarcophilus harrisii ENSSHAG00000015091 I 0.000
ZIC2 Sus scrofa ENSSSCG00000009520 I 0.000
ZIC1 Sus scrofa ENSSSCG00000011692 I 0.000
ZIC4 Sus scrofa ENSSSCG00000011693 I 0.000
ZIC3 Sus scrofa ENSSSCG00000012705 I 0.000
ENSSTOG00000000952 Ictidomys tridecemlineatus ENSSTOG00000000952 I 0.000
ENSSTOG00000015977 Ictidomys tridecemlineatus ENSSTOG00000015977 I 0.000
ENSSTOG00000023178 Ictidomys tridecemlineatus ENSSTOG00000023178 I 0.000
ENSSTOG00000024153 Ictidomys tridecemlineatus ENSSTOG00000024153 I 0.000
ENSSTOG00000027399 Ictidomys tridecemlineatus ENSSTOG00000027399 I 0.000
ZIC3 Taeniopygia guttata ENSTGUG00000002155 I 0.000
ENSTGUG00000008837 Taeniopygia guttata ENSTGUG00000008837 I 0.000
ZIC1 Taeniopygia guttata ENSTGUG00000008838 I 0.000
zic1 Tetraodon nigroviridis ENSTNIG00000012758 I 0.000
zic4 Tetraodon nigroviridis ENSTNIG00000012759 I 0.000
zic2b Tetraodon nigroviridis ENSTNIG00000014979 I 0.000
zic3 Tetraodon nigroviridis ENSTNIG00000016841 I 0.000
zic3 Takifugu rubripes ENSTRUG00000003550 I 0.000
zic1 Takifugu rubripes ENSTRUG00000017760 I 0.000
zic4 Takifugu rubripes ENSTRUG00000017765 I 0.000
ENSTSYG00000003356 Tarsius syrichta ENSTSYG00000003356 I 0.000
ZIC2 Tursiops truncatus ENSTTRG00000002568 I 0.000
ZIC4 Tursiops truncatus ENSTTRG00000014343 I 0.000
ZIC1 Tursiops truncatus ENSTTRG00000014350 I 0.000
ENSXMAG00000009162 Xiphophorus maculatus ENSXMAG00000009162 I 0.000
ENSXMAG00000009164 Xiphophorus maculatus ENSXMAG00000009164 I 0.000
ENSXMAG00000010995 Xiphophorus maculatus ENSXMAG00000010995 I 0.000
ENSXMAG00000010996 Xiphophorus maculatus ENSXMAG00000010996 I 0.000
ENSXMAG00000013404 Xiphophorus maculatus ENSXMAG00000013404 I 0.000
L798_08424 Zootermopsis nevadensis L798_08424 I 0.000
LotgiG193238 Lottia gigantea LotgiG193238 I 0.000
PHUM303860 Pediculus humanus PHUM303860 I 0.000
SMAR005380 Strigamia maritima SMAR005380 I 0.000
SPU_028583 Strongylocentrotus purpuratus SPU_028583 I 0.000
SPU_030070 Strongylocentrotus purpuratus SPU_030070 I 0.000
Aan_R004772 Calypte anna Aan_R004772 I 0.000
Aan_R005804 Calypte anna Aan_R005804 I 0.000
Aan_R013349 Calypte anna Aan_R013349 I 0.000
Alligator_sinensis_CCG005717.1 Alligator sinensis Alligator_sinensis_CCG005717.1 I 0.000
Alligator_sinensis_CCG012204.1 Alligator sinensis Alligator_sinensis_CCG012204.1 I 0.000
Alligator_sinensis_CCG012205.1 Alligator sinensis Alligator_sinensis_CCG012205.1 I 0.000
Alligator_sinensis_CCG018453.1 Alligator sinensis Alligator_sinensis_CCG018453.1 I 0.000
Cmyd_10016552 Chelonia mydas Cmyd_10016552 I 0.000
Cmyd_10020767 Chelonia mydas Cmyd_10020767 I 0.000
ENSBTAP00000035289-D2 Bos grunniens ENSBTAP00000035289-D2 I 0.000
ENSP00000282928-D1 Bos grunniens ENSP00000282928-D1 I 0.000
ENSP00000282928 Macaca fascicularis ENSP00000282928 I 0.000
ENSP00000287538-D1 Bos grunniens ENSP00000287538-D1 I 0.000
ENSP00000287538 Macaca fascicularis ENSP00000287538 I 0.000
ENSP00000397695-D1 Bos grunniens ENSP00000397695-D1 I 0.000
ENSP00000397695 Macaca fascicularis ENSP00000397695 I 0.000
Gfo_R005436 Geospiza fortis Gfo_R005436 I 0.000
Gfo_R015355 Geospiza fortis Gfo_R015355 I 0.000
Myotis_brandtii_PCCA_10007322 Myotis brandtii Myotis_brandtii_PCCA_10007322 I 0.000
Myotis_brandtii_ZIC1_10009541 Myotis brandtii Myotis_brandtii_ZIC1_10009541 I 0.000
Myotis_brandtii_ZIC3_10005513 Myotis brandtii Myotis_brandtii_ZIC3_10005513 I 0.000
Myotis_brandtii_Zic4_10009542 Myotis brandtii Myotis_brandtii_Zic4_10009542 I 0.000
Ogr05309 Ophisaurus gracilis Ogr05309 I 0.000
Ogr15027 Ophisaurus gracilis Ogr15027 I 0.000
Ogr15030 Ophisaurus gracilis Ogr15030 I 0.000
Ogr17255 Ophisaurus gracilis Ogr17255 I 0.000
Pvit_01478 Pogona vitticeps Pvit_01478 I 0.000
Pvit_01479 Pogona vitticeps Pvit_01479 I 0.000
Pvit_14047 Pogona vitticeps Pvit_14047 I 0.000
estExt_gwp.C_400285 Branchiostoma floridae estExt_gwp.C_400285 I 0.000
zic4 Xenopus tropicalis XB-GENE-1033015 I 0.000
zic4.L Xenopus laevis XB-GENE-1033019 I 0.000
zic3 Xenopus tropicalis XB-GENE-480431 I 0.000
zic5 Xenopus tropicalis XB-GENE-480775 I 0.000
zic2.L Xenopus laevis XB-GENE-482658 I 0.000
zic2.S Xenopus laevis XB-GENE-6251643 I 0.000
zic1.S Xenopus laevis XB-GENE-864815 I 0.000
zic3.S Xenopus laevis XB-GENE-865376 I 0.000
zic5.S Xenopus laevis XB-GENE-865408 I 0.000
XP_002937379 Xenopus tropicalis XP_002937379 I 0.000