evm.TU.supercontig_5.106 (Carica papaya)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 evm.TU.supercontig_5.106 T228556_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATHB-51
M00867_2.00 		Arabidopsis thaliana
ATWATKNN
NNMATWAT		 PBM
Franco-Zorrilla et al.(2014)
ATHB51 		0.787 0.877
ATHB-51
M06927_2.00 		Arabidopsis thaliana
DNCAATAATTGAD
HTCAATTATTGNH		 Dap-seq
OMalley et al.(2016)
LMI1_col_a 		0.787 0.877
ATHB-51
M06928_2.00 		Arabidopsis thaliana
NDNCAATAATTGA
TCAATTATTGNHN		 Dap-seq
OMalley et al.(2016)
LMI1_colamp_a 		0.787 0.877
ATHB-22
M02041_2.00 		Arabidopsis thaliana
NNATAATWWWNNN
NNNWWWATTATNN		 PBM
Weirauch et al.(2014)
pTH5883 		0.753 0.754
PK20392.1
M01250_2.00 		Cannabis sativa
NHAATMATDN
NHATKATTDN		 PBM
Lambert et al.(2019)
pTH11331 		0.721 0.649
PK20392.1
M01251_2.00 		Cannabis sativa
NHAATMATDN
NHATKATTDN		 PBM
Lambert et al.(2019)
pTH11332 		0.721 0.649
ATHB-20
M06912_2.00 		Arabidopsis thaliana
HYAATAATTRD
HYAATTATTRD		 Dap-seq
OMalley et al.(2016)
ATHB20_col_a 		0.701 0.632
ATHB-20
M06913_2.00 		Arabidopsis thaliana
HYAATMATTRD
HYAATKATTRD		 Dap-seq
OMalley et al.(2016)
ATHB20_colamp_a 		0.701 0.632
estExt_gwp_gw1.C_70211
M02220_2.00 		Physcomitrella patens
HMATNANDNN
NNHNTNATKD		 PBM
Weirauch et al.(2014)
pTH8489 		0.613 0.702
ATHB-6
M02040_2.00 		Arabidopsis thaliana
HATNATTDN
NHAATNATD		 PBM
Weirauch et al.(2014)
pTH7670 		0.613 0.649
ATHB-16
M02050_2.00 		Arabidopsis thaliana
YAATMATT
AATKATTR		 PBM
Weirauch et al.(2014)
pTH7270 		0.613 0.649
ATHB-6
M06909_2.00 		Arabidopsis thaliana
NNNHATKATTR
YAATMATDNNN		 Dap-seq
OMalley et al.(2016)
ATHB6_col_a 		0.613 0.649
ATHB-6
M06910_2.00 		Arabidopsis thaliana
NCAATAATTRN
NYAATTATTGN		 Dap-seq
OMalley et al.(2016)
ATHB6_colamp_a 		0.613 0.649
HAT5
M06914_2.00 		Arabidopsis thaliana
NHAATAATTDW
WHAATTATTDN		 Dap-seq
OMalley et al.(2016)
HAT5_col_a 		0.601 0.667
HAT5
M06915_2.00 		Arabidopsis thaliana
WNYAATAATTRWDN
NHWYAATTATTRNW		 Dap-seq
OMalley et al.(2016)
HAT5_colamp_a 		0.601 0.667
HAT5
M02683_2.00 		Arabidopsis thaliana
SCAATAATTNNV
BNNAATTATTGS		 SELEX
Mathelier et al.(2014)
MA0008.2 		0.601 0.667
HAT5
M10624_2.00 		Arabidopsis thaliana
YSCAATAATTNNVN
NBNNAATTATTGSR		 Transfac
Matys et al.(2006)
P$ATHB1_01 		0.601 0.667
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_5.106 Homeodomain 64 120

Links

Other Homeodomain family TFs
Other Carica papaya TFs

362 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ase Drosophila melanogaster FBgn0000137 D
ase Drosophila yakuba FBgn0022827 I
ase Drosophila erecta FBgn0043711 I
GA17007 Drosophila pseudoobscura FBgn0077021 I
GF21452 Drosophila ananassae FBgn0098453 I
GH24345 Drosophila grimshawi FBgn0131801 I
GI11000 Drosophila mojavensis FBgn0133763 I
GD16504 Drosophila simulans FBgn0188111 I
GK25272 Drosophila willistoni FBgn0227231 I
L798_10211 Zootermopsis nevadensis L798_10211 I
RPRC001627 Rhodnius prolixus RPRC001627 I
TC008433 Tribolium castaneum TC008433 I
YQE_00101 Dendroctonus ponderosae YQE_00101 I
HHAL003290-PA Halyomorpha halys HHAL003290-PA I
AMEC019303 Anopheles melas AMEC019303 N
AFUN011482 Anopheles funestus AFUN011482 N
AMAM014999 Anopheles maculatus AMAM014999 N
AQUA002447 Anopheles quadriannulatus AQUA002447 N
AMEM003072 Anopheles merus AMEM003072 N
AMIN005829 Anopheles minimus AMIN005829 N
AAEL008346 Aedes aegypti AAEL008346 N
AFAF016022 Anopheles farauti AFAF016022 N
AEPI000454 Anopheles epiroticus AEPI000454 N
ACUA018382 Anopheles culicifacies ACUA018382 N
AARA002562 Anopheles arabiensis AARA002562 N
CLEC002432 Cimex lectularius CLEC002432 N
AGAP000876 Anopheles gambiae AGAP000876 N