Gorai.009G002500 (Gossypium raimondii)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Gorai.009G002500 T228763_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MTR_2g038000
M02141_2.00 		Medicago truncatula
NDNYWNNNNN
NNNNNWRNHN		 PBM
Weirauch et al.(2014)
pTH6339 		0.630 0.667
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.009G002500.1 Homeodomain 495 551
Gorai.009G002500.2 Homeodomain 495 551
Gorai.009G002500.3 Homeodomain 495 551
Gorai.009G002500.4 Homeodomain 495 545
Gorai.009G002500.5 Homeodomain 495 551
Gorai.009G002500.6 Homeodomain 495 545

Links

Other Homeodomain family TFs
Other Gossypium raimondii TFs

32 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL009212 Aedes aegypti AAEL009212 I
NV30904 Nasonia vitripennis NV30904 N
ASTEI05993 Anopheles stephensi ASTEI05993 N
ASIS018105 Anopheles sinensis ASIS018105 N
ADIR004657 Anopheles dirus ADIR004657 N
ACUA004154 Anopheles culicifacies ACUA004154 N
AATE008285 Anopheles atroparvus AATE008285 N
LDEC000374 Leptinotarsa decemlineata LDEC000374 N
LCUP002990 Lucilia cuprina LCUP002990 N
HHAL002502-PA Halyomorpha halys HHAL002502-PA N
CLEC008551 Cimex lectularius CLEC008551 N
Cflo_10046--XP_001120340.1_APIME Camponotus floridanus Cflo_10046--XP_001120340.1_APIME N
RPRC014104 Rhodnius prolixus RPRC014104 N
NV30906 Nasonia vitripennis NV30906 N
GB53480 Apis mellifera GB53480 N
GE13093 Drosophila yakuba FBgn0230795 N
GJ20133 Drosophila virilis FBgn0207273 N
GD25971 Drosophila simulans FBgn0197248 N
GM20512 Drosophila sechellia FBgn0175394 N
GL17193 Drosophila persimilis FBgn0154796 N
GI20183 Drosophila mojavensis FBgn0142919 N
GH20622 Drosophila grimshawi FBgn0128085 N
GG22734 Drosophila erecta FBgn0114899 N
GF11097 Drosophila ananassae FBgn0088137 N
AGAP005245 Anopheles gambiae AGAP005245 N
ACEP17037 Atta cephalotes ACEP17037 N