Lus10016026.g (Linum usitatissimum)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Lus10016026.g T228871_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GRMZM2G038252
M02137_2.00 		Zea mays
HTRATTGV
BCAATYAD		 PBM
Weirauch et al.(2014)
pTH6141 		0.764 0.667
WOX13
M02049_2.00 		Arabidopsis thaliana
YTGATTGA
TCAATCAR		 PBM
Weirauch et al.(2014)
pTH6461 		0.764 0.632
WOX13
M00866_2.00 		Arabidopsis thaliana
NNTGATTGAN
NTCAATCANN		 PBM
Franco-Zorrilla et al.(2014)
WOX13 		0.764 0.632
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10016026 Homeodomain 98 159

Links

Other Homeodomain family TFs
Other Linum usitatissimum TFs

181 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GALMADRAFT_53514 Galerina marginata GALMADRAFT_53514 N
HYDPIDRAFT_110944 Hydnomerulius pinastri HYDPIDRAFT_110944 N
JAAARDRAFT_29176 Jaapia argillacea JAAARDRAFT_29176 N
M404DRAFT_8219 Pisolithus tinctorius M404DRAFT_8219 N
PAXRUDRAFT_828316 Paxillus rubicundulus PAXRUDRAFT_828316 N
PILCRDRAFT_2899 Piloderma croceum PILCRDRAFT_2899 N