CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MDP0000269415
(
Malus domestica
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
MDP0000269415
T229050_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000269415
Homeodomain
146
191
ARKKLRLSKSQSTFLEESFKEHNTLNPKQKLALAKQLNLRPRQVES
Links
Other
Homeodomain
family TFs
Other
Malus domestica
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OLONG_011261
Oryza longistaminata
OLONG_011261
I
0.831
GRMZM2G318412
Zea mays
GRMZM2G318412
N
0.762
Moror_5313
Moniliophthora roreri
Moror_5313
N
0.669
OBART10G17410
Oryza barthii
OBART10G17410
N
0.766
OGLUM09G20340
Oryza glumaepatula
OGLUM09G20340
N
0.717
ONIVA10G19630
Oryza nivara
ONIVA10G19630
N
0.766
Traes_4AL_69EEFB3DA
Triticum aestivum
Traes_4AL_69EEFB3DA
N
0.715
TRIUR3_34646
Triticum urartu
TRIUR3_34646
N
0.694