MDP0000841379 (Malus domestica)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 MDP0000841379 T229118_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATH1
M10627_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATH1_01 		0.843 0.796
Q5EVH4_OIKDI
M02227_2.00 		Oikopleura dioica
NTGACAKN
NMTGTCAN		 PBM
Weirauch et al.(2014)
pTH6041 		0.626 0.551
MEIS3
M03093_2.00 		Homo sapiens
DTGACANN
NNTGTCAH		 SELEX
Jolma et al.(2013)
MEIS3_1 		0.602 0.429
MEIS3
M03094_2.00 		Homo sapiens
TGACAGSTGTCA
TGACASCTGTCA		 SELEX
Jolma et al.(2013)
MEIS3_2 		0.602 0.429
MEIS3
M04951_2.00 		Homo sapiens
TGWCABVTGWCA
TGWCABVTGWCA		 SELEX
Yin et al.(2017)
MEIS3_eDBD_HT-SELEX 		0.602 0.429
MEIS3
M04952_2.00 		Homo sapiens
YGWCABVTGWCR
YGWCABVTGWCR		 SELEX
Yin et al.(2017)
MEIS3_eDBD_Methyl-HT-SELEX 		0.602 0.429
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000841379 Homeodomain 393 444

Links

Other Homeodomain family TFs
Other Malus domestica TFs

1012 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O3_04352 Capronia epimyces A1O3_04352 N
A1O5_10239 Cladophialophora psammophila A1O5_10239 N
CADAFLAG00001201 Aspergillus flavus CADAFLAG00001201 N
CADANGAG00001362 Aspergillus niger CADANGAG00001362 N
CADAORAG00003082 Aspergillus oryzae CADAORAG00003082 N
HMPREF1541_07161 Cyphellophora europaea HMPREF1541_07161 N
PCH_Pc06g01270 Penicillium rubens PCH_Pc06g01270 N
PDE_00451 Penicillium oxalicum PDE_00451 N
PV07_02500 Cladophialophora immunda PV07_02500 N
Z517_00100 Fonsecaea pedrosoi Z517_00100 N
Z519_10905 Cladophialophora bantiana Z519_10905 N