Thhalv10011238m.g (Eutrema salsugineum)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Thhalv10011238m.g T229558_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATHB-15
M00864_2.00 		Arabidopsis thaliana
AATAATTACT
AGTAATTATT		 PBM
Franco-Zorrilla et al.(2014)
ICU4 		0.867 1.000
ATHB-15
M06899_2.00 		Arabidopsis thaliana
DWWDRTAATGATKAH
DTMATCATTAYHWWH		 Dap-seq
OMalley et al.(2016)
ATHB15_col_a 		0.867 1.000
ATHB-9
M06898_2.00 		Arabidopsis thaliana
DWWDRTAATGATKAH
DTMATCATTAYHWWH		 Dap-seq
OMalley et al.(2016)
PHV_col_a 		0.861 0.911
ATHB-9
M02682_2.00 		Arabidopsis thaliana
HNHHGTAATGATTRCDYBS
SVRHGYAATCATTACDDND		 SELEX
Mathelier et al.(2014)
MA0573.1 		0.861 0.911
ATHB-9
M10623_2.00 		Arabidopsis thaliana
HNHHGTAATGATTRCDYBS
SVRHGYAATCATTACDDND		 Transfac
Matys et al.(2006)
P$ATHB9_01 		0.861 0.911
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10011238m Homeodomain 16 75

Links

Other Homeodomain family TFs
Other Eutrema salsugineum TFs

335 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANIA_10120 Aspergillus nidulans CADANIAG00001891 D 0.000
PVAR5_4079 Byssochlamys spectabilis PVAR5_4079 I 0.000
Mycgr3G21205 Zymoseptoria tritici Mycgr3G21205 I 0.000
PAAG_12029 Paracoccidioides sp lutzii PAAG_12029 I 0.000
PABG_06000 Paracoccidioides brasiliensis PABG_06000 I 0.000
PCH_Pc16g12950 Penicillium rubens PCH_Pc16g12950 I 0.000
PDE_00300 Penicillium oxalicum PDE_00300 I 0.000
PEX1_010850 Penicillium expansum PEX1_010850 I 0.000
PITC_091680 Penicillium italicum PITC_091680 I 0.000
PMAA_065570 Talaromyces marneffei PMAA_065570 I 0.000
MYCFIDRAFT_140661 Pseudocercospora fijiensis MYCFIDRAFT_140661 I 0.000
TSTA_085600 Talaromyces stipitatus TSTA_085600 I 0.000
U727_00432720241 Penicillium solitum U727_00432720241 I 0.000
gw1.6.805.1 Mycosphaerella graminicola gw1.6.805.1 I 0.000
fgenesh1_pm.00042_#_235 Aspergillus carbonarius fgenesh1_pm.00042_#_235 I 0.000
Pc16g12950 Penicillium chrysogenum Pc16g12950 I 0.000
PMAA_065570 Penicillium marneffei PMAA_065570 I 0.000
CIMG_03190 Coccidioides immitis CIMG_03190 I 0.000
MBM_04933 Marssonina brunnea MBM_04933 I 0.000
M438DRAFT_276450 Aureobasidium pullulans M438DRAFT_276450 I 0.000
M437DRAFT_18298 Aureobasidium melanogenum M437DRAFT_18298 I 0.000
HCBG_01404 Histoplasma capsulatum HCBG_01404 I 0.000
EURHEDRAFT_447655 Aspergillus ruber EURHEDRAFT_447655 I 0.000
EPUS_07650 Endocarpon pusillum EPUS_07650 I 0.000
ATEG_00638 Aspergillus terreus CADATEAG00009286 I 0.000
CADAORAG00005134 Aspergillus oryzae CADAORAG00005134 I 0.000
CADANGAG00001240 Aspergillus niger CADANGAG00001240 I 0.000
AFUA_1G14360 Aspergillus fumigatus CADAFUAG00007111 I 0.000
CADAFLAG00005530 Aspergillus flavus CADAFLAG00005530 I 0.000
ACLA_021050 Aspergillus clavatus CADACLAG00002292 I 0.000
BDDG_03741 Blastomyces dermatitidis BDDG_03741 I 0.000
AUEXF2481DRAFT_183957 Aureobasidium subglaciale AUEXF2481DRAFT_183957 I 0.000