Thhalv10024509m.g (Eutrema salsugineum)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Thhalv10024509m.g T229604_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATH1
M10627_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATH1_01 		0.838 0.688
Q5EVH4_OIKDI
M02227_2.00 		Oikopleura dioica
NTGACAKN
NMTGTCAN		 PBM
Weirauch et al.(2014)
pTH6041 		0.626 0.562
MEIS3
M03093_2.00 		Homo sapiens
DTGACANN
NNTGTCAH		 SELEX
Jolma et al.(2013)
MEIS3_1 		0.606 0.438
MEIS3
M03094_2.00 		Homo sapiens
TGACAGSTGTCA
TGACASCTGTCA		 SELEX
Jolma et al.(2013)
MEIS3_2 		0.606 0.438
MEIS3
M04951_2.00 		Homo sapiens
TGWCABVTGWCA
TGWCABVTGWCA		 SELEX
Yin et al.(2017)
MEIS3_eDBD_HT-SELEX 		0.606 0.438
MEIS3
M04952_2.00 		Homo sapiens
YGWCABVTGWCR
YGWCABVTGWCR		 SELEX
Yin et al.(2017)
MEIS3_eDBD_Methyl-HT-SELEX 		0.606 0.438
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10024509m Homeodomain 508 558

Links

Other Homeodomain family TFs
Other Eutrema salsugineum TFs

1012 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Mnt Mus musculus ENSMUSG00000000282 D 0.000
MNT Homo sapiens ENSG00000070444 D 0.000
MNT Tetraodon nigroviridis ENSTNIG00000005816 I 0.000
ENSAMEG00000007541 Ailuropoda melanoleuca ENSAMEG00000007541 I 0.000
mntb Oryzias latipes ENSORLG00000002734 I 0.000
MNT Oryzias latipes ENSORLG00000007865 I 0.000
ENSPANG00000024466 Papio anubis ENSPANG00000024466 I 0.000
MNT Procavia capensis ENSPCAG00000013160 I 0.000
ENSPFOG00000010412 Poecilia formosa ENSPFOG00000010412 I 0.000
ENSPFOG00000015158 Poecilia formosa ENSPFOG00000015158 I 0.000
ENSPSIG00000013581 Pelodiscus sinensis ENSPSIG00000013581 I 0.000
MNT Pan troglodytes ENSPTRG00000008549 I 0.000
ENSPVAG00000002166 Pteropus vampyrus ENSPVAG00000002166 I 0.000
Mnt Rattus norvegicus ENSRNOG00000002894 I 0.000
ENSSTOG00000026802 Ictidomys tridecemlineatus ENSSTOG00000026802 I 0.000
MNT Taeniopygia guttata ENSTGUG00000008774 I 0.000
ENSONIG00000008731 Oreochromis niloticus ENSONIG00000008731 I 0.000
mntb Takifugu rubripes ENSTRUG00000011273 I 0.000
MNT Takifugu rubripes ENSTRUG00000015800 I 0.000
ENSXMAG00000008629 Xiphophorus maculatus ENSXMAG00000008629 I 0.000
ENSXMAG00000011266 Xiphophorus maculatus ENSXMAG00000011266 I 0.000
SMAR003191 Strigamia maritima SMAR003191 I 0.000
Aan_R004293 Calypte anna Aan_R004293 I 0.000
Afo_R013625 Aptenodytes forsteri Afo_R013625 I 0.000
Brh_R005672 Buceros rhinoceros Brh_R005672 I 0.000
ENSP00000384177-D1 Bos grunniens ENSP00000384177-D1 I 0.000
Gfo_R012737 Geospiza fortis Gfo_R012737 I 0.000
Ogr16275 Ophisaurus gracilis Ogr16275 I 0.000
Pvit_02549 Pogona vitticeps Pvit_02549 I 0.000
mnt.L Xenopus laevis XB-GENE-6087152 I 0.000
ENSFALG00000004754 Ficedula albicollis ENSFALG00000004754 I 0.000
ENSAMXG00000008763 Astyanax mexicanus ENSAMXG00000008763 I 0.000
ENSAMXG00000020050 Astyanax mexicanus ENSAMXG00000020050 I 0.000
ENSAPLG00000003927 Anas platyrhynchos ENSAPLG00000003927 I 0.000
MNT Bos taurus ENSBTAG00000025129 I 0.000
MNT Canis familiaris ENSCAFG00000019295 I 0.000
MNT Callithrix jacchus ENSCJAG00000012389 I 0.000
ENSCPOG00000014839 Cavia porcellus ENSCPOG00000014839 I 0.000
ENSCSAG00000013771 Chlorocebus sabaeus ENSCSAG00000013771 I 0.000
mntb Danio rerio ENSDARG00000073988 I 0.000
MNT Danio rerio ENSDARG00000101859 I 0.000
MNT Dasypus novemcinctus ENSDNOG00000040019 I 0.000
ENSONIG00000008133 Oreochromis niloticus ENSONIG00000008133 I 0.000
MNT Felis catus ENSFCAG00000006315 I 0.000
MNT Meleagris gallopavo ENSMGAG00000008592 I 0.000
MNT Otolemur garnettii ENSOGAG00000004499 I 0.000
MNT Oryctolagus cuniculus ENSOCUG00000016100 I 0.000
ENSOARG00000015698 Ovis aries ENSOARG00000015698 I 0.000
ENSMPUG00000012867 Mustela putorius furo ENSMPUG00000012867 I 0.000
MNT Monodelphis domestica ENSMODG00000010713 I 0.000
MNT Macaca mulatta ENSMMUG00000022004 I 0.000
MNT Gasterosteus aculeatus ENSGACG00000008790 I 0.000
ENSMEUG00000015884 Macropus eugenii ENSMEUG00000015884 I 0.000
ENSLACG00000018117 Latimeria chalumnae ENSLACG00000018117 I 0.000
ENSGMOG00000011558 Gadus morhua ENSGMOG00000011558 I 0.000
MNT Gorilla gorilla ENSGGOG00000002455 I 0.000
MNT Gallus gallus ENSGALG00000005830 I 0.000
mntb Gasterosteus aculeatus ENSGACG00000020487 I 0.000
YQE_11244 Dendroctonus ponderosae YQE_11244 N 0.000
NEMVEDRAFT_v1g240935 Nematostella vectensis NEMVEDRAFT_v1g240935 N 0.000
fgenesh2_pg.scaffold_104000022 Branchiostoma floridae fgenesh2_pg.scaffold_104000022 N 0.000
fgenesh2_pg.scaffold_290000014 Branchiostoma floridae fgenesh2_pg.scaffold_290000014 N 0.000