HHAL006656-PA (Halyomorpha halys)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 HHAL006656-PA T229850_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Six4
M00563_2.00 		Drosophila melanogaster
NNDANMHNN
NNDKNTHNN		 PBM
Busser et al.(2012a)
Six4 		0.755 0.833
Six4
M06530_2.00 		Drosophila melanogaster
TGABAC
GTVTCA		 B1H
Mathelier et al.(2014)
MA0204.1 		0.755 0.833
Six4
M06334_2.00 		Drosophila melanogaster
WDDTGABAC
GTVTCAHHW		 B1H
Zhu et al.(2011)
Six4_Cell_FBgn0027364 		0.755 0.833
Six4
M06335_2.00 		Drosophila melanogaster
NTGAKACB
VGTMTCAN		 B1H
Zhu et al.(2011)
Six4_SOLEXA_2_FBgn0027364 		0.755 0.833
Six4
M06336_2.00 		Drosophila melanogaster
NNNTGABA
TVTCANNN		 B1H
Zhu et al.(2011)
Six4_SOLEXA_FBgn0027364 		0.755 0.833
Six4
M00461_2.00 		Mus musculus
NNKABMHNN
NNDKVTMNN		 PBM
Berger et al.(2008)
Six4_2860 		0.743 0.796
SIX4
M04939_2.00 		Homo sapiens
NVYGATACVB
VBGTATCRBN		 SELEX
Yin et al.(2017)
SIX4_eDBD_HT-SELEX 		0.743 0.796
Six4
M09198_2.00 		Mus musculus
DGDAABHNSASNNN
NNNSTSNDVTTHCH		 Misc
Kulakovskiy et al.(2013)
SIX4_MOUSE.H11MO.0.C 		0.743 0.796
SIX4
M10646_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SIX4_Q3 		0.743 0.796
SIX4
M04940_2.00 		Homo sapiens
NBGTAWCRHN
NDYGWTACVN		 SELEX
Yin et al.(2017)
SIX4_eDBD_Methyl-HT-SELEX 		0.743 0.796
SIX5
M08208_2.00 		Homo sapiens
GARWTGTAGT
ACTACAWYTC		 ChIP-seq
Contrino et al.(2012)
Mv121 		0.741 0.759
SIX5
M08209_2.00 		Homo sapiens
GGAGTTGT
ACAACTCC		 ChIP-seq
Contrino et al.(2012)
Mv123 		0.741 0.759
SIX5
M10738_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SIX5_01 		0.741 0.759
SIX5
M10739_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SIX5_02 		0.741 0.759
Six2
M00425_2.00 		Mus musculus
NNAYMYNN
NNRKRTNN		 PBM
Berger et al.(2008)
Six2_2307 		0.708 0.741
Six1
M00512_2.00 		Mus musculus
NNDATMYNNN
NNNRKATHNN		 PBM
Berger et al.(2008)
Six1_0935 		0.708 0.741
SIX1
M05094_2.00 		Homo sapiens
NNYGATACVB
VBGTATCRNN		 SELEX
Yin et al.(2017)
SIX1_eDBD_HT-SELEX 		0.708 0.741
SIX1
M05096_2.00 		Homo sapiens
NNYGATAYVB
VBRTATCRNN		 SELEX
Yin et al.(2017)
SIX1_FL_HT-SELEX 		0.708 0.741
SIX2
M05285_2.00 		Homo sapiens
NNYGATACSB
VSGTATCRNN		 SELEX
Yin et al.(2017)
SIX2_eDBD_HT-SELEX 		0.708 0.741
SIX2
M05287_2.00 		Homo sapiens
NSGTRWCRYN
NRYGWYACSN		 SELEX
Yin et al.(2017)
SIX2_FL_HT-SELEX 		0.708 0.741
SIX1
M08130_2.00 		Homo sapiens
GWAACCTGANM
KNTCAGGTTWC		 ChIP-seq
Mathelier et al.(2014)
MA1118.1 		0.708 0.741
SIX2
M08133_2.00 		Homo sapiens
NNNTGWAACCTGAKMH
DKMTCAGGTTWCANNN		 ChIP-seq
Mathelier et al.(2014)
MA1119.1 		0.708 0.741
SIX1
M09142_2.00 		Homo sapiens
DGWAAYHTGABMYN
NRKVTCADRTTWCH		 Misc
Kulakovskiy et al.(2013)
SIX1_HUMAN.H11MO.0.A 		0.708 0.741
SIX2
M09157_2.00 		Homo sapiens
DGWAAYHHGABMH
DKVTCDDRTTWCH		 Misc
Kulakovskiy et al.(2013)
SIX2_HUMAN.H11MO.0.A 		0.708 0.741
Six2
M09185_2.00 		Mus musculus
DGWAAYHYRABMYB
VRKVTYRDRTTWCH		 Misc
Kulakovskiy et al.(2013)
SIX2_MOUSE.H11MO.0.A 		0.708 0.741
Six1
M09579_2.00 		Mus musculus
GWAAYHTGABMH
DKVTCADRTTWC		 Misc
Heinz et al.(2010)
Myoblast-Six1_GSE20150 		0.708 0.741
SIX1
M10684_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SIX1_Q3_01 		0.708 0.741
SIX1
M10685_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SIX1_Q3 		0.708 0.741
SIX1
M05095_2.00 		Homo sapiens
NNYGATABNB
VNVTATCRNN		 SELEX
Yin et al.(2017)
SIX1_eDBD_Methyl-HT-SELEX 		0.708 0.741
SIX1
M05097_2.00 		Homo sapiens
NNYGATAYSB
VSRTATCRNN		 SELEX
Yin et al.(2017)
SIX1_FL_Methyl-HT-SELEX 		0.708 0.741
SIX2
M05286_2.00 		Homo sapiens
NBRTATCRNN
NNYGATAYVN		 SELEX
Yin et al.(2017)
SIX2_eDBD_Methyl-HT-SELEX 		0.708 0.741
SIX2
M05288_2.00 		Homo sapiens
VBRTAWCRNN
NNYGWTAYVB		 SELEX
Yin et al.(2017)
SIX2_FL_Methyl-HT-SELEX 		0.708 0.741
so
M02117_2.00 		Drosophila melanogaster
NDATMYNNN
NNNRKATHN		 PBM
Weirauch et al.(2014)
pTH5690 		0.708 0.722
so
M03800_2.00 		Drosophila melanogaster
NYGATAYB
VRTATCRN		 SELEX
Nitta et al.(2015)
so_1 		0.708 0.722
so
M03801_2.00 		Drosophila melanogaster
YKATAYNNNYGATAY
RTATCRNNNRTATMR		 SELEX
Nitta et al.(2015)
so_2 		0.708 0.722
so
M03802_2.00 		Drosophila melanogaster
YGATACGTATCR
YGATACGTATCR		 SELEX
Nitta et al.(2015)
so_3 		0.708 0.722
so
M03803_2.00 		Drosophila melanogaster
RTATCRYGATAC
GTATCRYGATAY		 SELEX
Nitta et al.(2015)
so_4 		0.708 0.722
so
M06497_2.00 		Drosophila melanogaster
TGATAC
GTATCA		 B1H
Mathelier et al.(2014)
MA0246.1 		0.708 0.722
so
M06268_2.00 		Drosophila melanogaster
NRTGATA
TATCAYN		 B1H
Zhu et al.(2011)
So_Cell_FBgn0003460 		0.708 0.722
so
M06269_2.00 		Drosophila melanogaster
NNNTGATA
TATCANNN		 B1H
Zhu et al.(2011)
So_SOLEXA_FBgn0003460 		0.708 0.722
ceh-34
M00672_2.00 		Caenorhabditis elegans
NNNRDAWNNN
NNNWTHYNNN		 PBM
Narasimhan et al.(2015)
pTH9708 		0.638 0.574
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
HHAL006656-PA Homeodomain 46 99

Links

Other Homeodomain family TFs
Other Halyomorpha halys TFs

537 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cmyd_10012804 Chelonia mydas Cmyd_10012804 N
Cmyd_10014780 Chelonia mydas Cmyd_10014780 N
Cmyd_10014779 Chelonia mydas Cmyd_10014779 N
Cmyd_10014771 Chelonia mydas Cmyd_10014771 N
Cmyd_10014427 Chelonia mydas Cmyd_10014427 N
Cmyd_10014022 Chelonia mydas Cmyd_10014022 N
Cmyd_10013937 Chelonia mydas Cmyd_10013937 N
Cmyd_10013718 Chelonia mydas Cmyd_10013718 N
Cmyd_10012972 Chelonia mydas Cmyd_10012972 N
Cmyd_10014889 Chelonia mydas Cmyd_10014889 N
Cmyd_10012482 Chelonia mydas Cmyd_10012482 N
Cmyd_10012472 Chelonia mydas Cmyd_10012472 N
Cmyd_10012220 Chelonia mydas Cmyd_10012220 N
Cmyd_10012194 Chelonia mydas Cmyd_10012194 N
Cmyd_10012100 Chelonia mydas Cmyd_10012100 N
Cmyd_10012053 Chelonia mydas Cmyd_10012053 N
Cmyd_10011896 Chelonia mydas Cmyd_10011896 N
Cmyd_10011542 Chelonia mydas Cmyd_10011542 N
Cmyd_10014894 Chelonia mydas Cmyd_10014894 N
Cmyd_10014903 Chelonia mydas Cmyd_10014903 N
Cmyd_10015037 Chelonia mydas Cmyd_10015037 N
Cmyd_10016005 Chelonia mydas Cmyd_10016005 N
Cmyd_10016549 Chelonia mydas Cmyd_10016549 N
Cmyd_10016788 Chelonia mydas Cmyd_10016788 N
Cmyd_10016810 Chelonia mydas Cmyd_10016810 N
Cmyd_10016989 Chelonia mydas Cmyd_10016989 N
Cmyd_10017203 Chelonia mydas Cmyd_10017203 N
Cmyd_10017310 Chelonia mydas Cmyd_10017310 N
Cmyd_10017596 Chelonia mydas Cmyd_10017596 N
Cmyd_10017906 Chelonia mydas Cmyd_10017906 N
Cmyd_10017938 Chelonia mydas Cmyd_10017938 N
Cmyd_10017985 Chelonia mydas Cmyd_10017985 N
Cmyd_10018053 Chelonia mydas Cmyd_10018053 N
Cmyd_10003938 Chelonia mydas Cmyd_10003938 N
Cmyd_10006722 Chelonia mydas Cmyd_10006722 N
Cmyd_10006667 Chelonia mydas Cmyd_10006667 N
Cmyd_10006621 Chelonia mydas Cmyd_10006621 N
Cmyd_10006184 Chelonia mydas Cmyd_10006184 N
Cmyd_10005732 Chelonia mydas Cmyd_10005732 N
Cmyd_10005354 Chelonia mydas Cmyd_10005354 N
Cmyd_10004763 Chelonia mydas Cmyd_10004763 N
Cmyd_10004639 Chelonia mydas Cmyd_10004639 N
Cmyd_10006726 Chelonia mydas Cmyd_10006726 N
Cmyd_10003577 Chelonia mydas Cmyd_10003577 N
Cmyd_10003504 Chelonia mydas Cmyd_10003504 N
Cmyd_10003439 Chelonia mydas Cmyd_10003439 N
Cmyd_10003172 Chelonia mydas Cmyd_10003172 N
Cmyd_10003126 Chelonia mydas Cmyd_10003126 N
Cmyd_10002130 Chelonia mydas Cmyd_10002130 N
Cmyd_10001989 Chelonia mydas Cmyd_10001989 N
Cmyd_10001487 Chelonia mydas Cmyd_10001487 N
Cmyd_10007527 Chelonia mydas Cmyd_10007527 N
Cmyd_10007685 Chelonia mydas Cmyd_10007685 N
Cmyd_10007900 Chelonia mydas Cmyd_10007900 N
Cmyd_10008315 Chelonia mydas Cmyd_10008315 N
Cmyd_10008565 Chelonia mydas Cmyd_10008565 N
Cmyd_10008649 Chelonia mydas Cmyd_10008649 N
Cmyd_10008722 Chelonia mydas Cmyd_10008722 N
Cmyd_10009235 Chelonia mydas Cmyd_10009235 N
Cmyd_10009634 Chelonia mydas Cmyd_10009634 N
Cmyd_10009643 Chelonia mydas Cmyd_10009643 N
Cmyd_10009827 Chelonia mydas Cmyd_10009827 N
Cmyd_10010344 Chelonia mydas Cmyd_10010344 N
Cmyd_10010768 Chelonia mydas Cmyd_10010768 N
Cmyd_10011031 Chelonia mydas Cmyd_10011031 N
Cmyd_10011536 Chelonia mydas Cmyd_10011536 N