LCUP003716 (Lucilia cuprina)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 LCUP003716 T229899_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
VSX1
M03087_2.00 		Homo sapiens
YTAATTAN
NTAATTAR		 SELEX
Jolma et al.(2013)
VSX1_1 		0.820 0.652
VSX1
M03088_2.00 		Homo sapiens
NNYAATTRRBN
NVYYAATTRNN		 SELEX
Jolma et al.(2013)
VSX1_2 		0.820 0.652
VSX1
M04941_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_HT-SELEX 		0.820 0.652
VSX1
M04944_2.00 		Homo sapiens
NTAATTRS
SYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_HT-SELEX 		0.820 0.652
VSX1
M05869_2.00 		Homo sapiens
DGCTAATTAN
NTAATTAGCH		 SMiLE-seq
Isakova et al.(2017)
VSX1 		0.820 0.652
VSX1
M04942_2.00 		Homo sapiens
NTAAYGMN
NKCRTTAN		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_1 		0.820 0.652
VSX1
M04943_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_2 		0.820 0.652
VSX1
M04945_2.00 		Homo sapiens
NTAATTRG
CYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_1 		0.820 0.652
VSX1
M04946_2.00 		Homo sapiens
NTAAYGAN
NTCRTTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_2 		0.820 0.652
VAX1
M03168_2.00 		Homo sapiens
YTAATKAN
NTMATTAR		 SELEX
Jolma et al.(2013)
VAX1_1 		0.718 0.413
VAX1
M05182_2.00 		Homo sapiens
BTAATTRN
NYAATTAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_HT-SELEX 		0.718 0.413
VAX1
M05183_2.00 		Homo sapiens
BTMATKRN
NYMATKAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_Methyl-HT-SELEX 		0.718 0.413
CG32532
M03874_2.00 		Drosophila melanogaster
NTAAYBNVRTTAN
NTAAYBNVRTTAN		 SELEX
Nitta et al.(2015)
CG32532_1 		0.377 1.000
CG32532
M06547_2.00 		Drosophila melanogaster
YTAATTR
YAATTAR		 B1H
Mathelier et al.(2014)
MA0179.1 		0.377 1.000
CG32532
M06370_2.00 		Drosophila melanogaster
YTAATTR
YAATTAR		 B1H
Zhu et al.(2011)
CG32532_Cell_FBgn0052532 		0.377 1.000
CG32532
M06371_2.00 		Drosophila melanogaster
HTAATTR
YAATTAD		 B1H
Zhu et al.(2011)
CG32532_SOLEXA_FBgn0052532 		0.377 1.000
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LCUP003716-PA Homeodomain 45 90

Links

Other Homeodomain family TFs
Other Lucilia cuprina TFs

1270 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
VDBG_09138 Verticillium albo atrum VDBG_09138 N 0.000
CCM_07676 Cordyceps militaris CCM_07676 N 0.000
FOXG_14560 Fusarium oxysporum FOXG_14560 N 0.000
MAC_07656 Metarhizium acridum MAC_07656 N 0.000
MAJ_09002 Metarhizium majus MAJ_09002 N 0.000
MBR_00024 Metarhizium brunneum MBR_00024 N 0.000
TRIATDRAFT_164285 Trichoderma atroviride TRIATDRAFT_164285 N 0.000
TRIREDRAFT_104104 Trichoderma reesei TRIREDRAFT_104104 N 0.000
TRIREDRAFT_109328 Trichoderma reesei TRIREDRAFT_109328 N 0.000
TRIVIDRAFT_125398 Trichoderma virens TRIVIDRAFT_125398 N 0.000
TRIVIDRAFT_133633 Trichoderma virens TRIVIDRAFT_133633 N 0.000
VDAG_07288 Verticillium dahliae VDAG_07288 N 0.000
VDBG_09138 Verticillium alfalfae VDBG_09138 N 0.000
X797_009923 Metarhizium robertsii X797_009923 N 0.000
estExt_Genewise1.C_42033 Cryphonectria parasitica estExt_Genewise1.C_42033 N 0.000