LDEC010767 (Leptinotarsa decemlineata)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 LDEC010767 T230022_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
VSX1
M03087_2.00 		Homo sapiens
YTAATTAN
NTAATTAR		 SELEX
Jolma et al.(2013)
VSX1_1 		0.719 0.710
VSX1
M03088_2.00 		Homo sapiens
NNYAATTRRBN
NVYYAATTRNN		 SELEX
Jolma et al.(2013)
VSX1_2 		0.719 0.710
VSX1
M04941_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_HT-SELEX 		0.719 0.710
VSX1
M04944_2.00 		Homo sapiens
NTAATTRS
SYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_HT-SELEX 		0.719 0.710
VSX1
M05869_2.00 		Homo sapiens
DGCTAATTAN
NTAATTAGCH		 SMiLE-seq
Isakova et al.(2017)
VSX1 		0.719 0.710
VSX1
M04942_2.00 		Homo sapiens
NTAAYGMN
NKCRTTAN		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_1 		0.719 0.710
VSX1
M04943_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_2 		0.719 0.710
VSX1
M04945_2.00 		Homo sapiens
NTAATTRG
CYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_1 		0.719 0.710
VSX1
M04946_2.00 		Homo sapiens
NTAAYGAN
NTCRTTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_2 		0.719 0.710
VAX1
M03168_2.00 		Homo sapiens
YTAATKAN
NTMATTAR		 SELEX
Jolma et al.(2013)
VAX1_1 		0.693 0.419
VAX1
M05182_2.00 		Homo sapiens
BTAATTRN
NYAATTAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_HT-SELEX 		0.693 0.419
VAX1
M05183_2.00 		Homo sapiens
BTMATKRN
NYMATKAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_Methyl-HT-SELEX 		0.693 0.419
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LDEC010767-PA Homeodomain 63 93

Links

Other Homeodomain family TFs
Other Leptinotarsa decemlineata TFs

1231 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Q8RUX5_MAIZE Zea mays Q8RUX5_MAIZE D 0.000
GRMZM2G111306 Zea mays GRMZM2G111306 I 0.000
GRMZM2G121111 Zea mays GRMZM2G121111 I 0.000
F775_02244 Aegilops tauschii F775_02244 I 0.000
Pavir.Da02101 Panicum virgatum Pavir.Da02101 I 0.000
Sb09g003390 Sorghum bicolor Sb09g003390 I 0.000
Sb10g006570 Sorghum bicolor Sb10g006570 I 0.000
Sb10g009580 Sorghum bicolor Sb10g009580 I 0.000
Si007889m.g Setaria italica Si007889m.g I 0.000
Pavir.J00203 Panicum virgatum Pavir.J00203 N 0.000
Pavir.Ga00772 Panicum virgatum Pavir.Ga00772 N 0.000
Si032375m.g Setaria italica Si032375m.g N 0.000
Si008720m.g Setaria italica Si008720m.g N 0.000
Sb10g009650 Sorghum bicolor Sb10g009650 N 0.000
Sb10g007420 Sorghum bicolor Sb10g007420 N 0.000
Sb01g029290 Sorghum bicolor Sb01g029290 N 0.000
OB06G14500 Oryza brachyantha OB06G14500 N 0.000
GRMZM2G422083 Zea mays GRMZM2G422083 N 0.000