CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SMU15004068
(
Schmidtea mediterranea
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
SMU15004068
T230217_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SMU15004068
Homeodomain
1222
1278
NRKRTQIKNHQYDILRSYFNINNPPNDETIAEIIDKTGLDKKTVKHWFRNTLFKERQ
SMU15004068
Homeodomain
1478
1534
RRHRTTLTAMQIQAMKSIFIHCRSPSHNELGTLGNVLSLDMRVVQVWFQNQRAKLKK
Links
Other
Homeodomain
family TFs
Other
Schmidtea mediterranea
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BTMF_0000333901
Brugia timori
BTMF_0000333901
N
0.639
csin104974
Clonorchis sinensis
csin104974
N
0.713
DILT_0000323001
Diphyllobothrium latum
DILT_0000323001
N
0.600
ECPE_0001051401
Echinostoma caproni
ECPE_0001051401
N
0.711
NBR_0000077301
Nippostrongylus brasiliensis
NBR_0000077301
N
0.620
SCUD_0001254201
Schistosoma curassoni
SCUD_0001254201
N
0.718
SMRZ_0001875501
Schistosoma margrebowiei
SMRZ_0001875501
N
0.718
T265_11578
Opisthorchis viverrini
T265_11578
N
0.713