CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AQUA008668
(
Anopheles quadriannulatus
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
AQUA008668
T232228_2.00
Vectorbase (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
vnd
M06551_2.00
Drosophila melanogaster
WYTCAAGTR
YACTTGARW
B1H
Mathelier et al.(2014)
MA0253.1
0.867
0.982
vnd
M06377_2.00
Drosophila melanogaster
WYTCAAGTR
YACTTGARW
B1H
Zhu et al.(2011)
Vnd_Cell_FBgn0003986
0.867
0.982
vnd
M06378_2.00
Drosophila melanogaster
KYTSAAGWGY
RCWCTTSARM
B1H
Zhu et al.(2011)
vnd_FlyReg_FBgn0003986
0.867
0.982
vnd
M06379_2.00
Drosophila melanogaster
BTBAAGTR
YACTTVAV
B1H
Zhu et al.(2011)
Vnd_SOLEXA_FBgn0003986
0.867
0.982
vnd
M09683_2.00
Drosophila melanogaster
TCAAGTGB
VCACTTGA
Misc
Kulakovskiy et al.(2009)
vnd
0.867
0.982
Nkx2-2
M00438_2.00
Mus musculus
NNNRAGDRN
NYHCTYNNN
PBM
Berger et al.(2008)
Nkx2-2_2823
0.850
0.982
Nkx2-2
M09190_2.00
Mus musculus
NTBRAGWGBBN
NVVCWCTYVAN
Misc
Kulakovskiy et al.(2013)
NKX22_MOUSE.H11MO.0.A
0.850
0.982
NKX2-2
M10681_2.00
Homo sapiens
WTAAGTRBTT
AAVYACTTAW
Transfac
Matys et al.(2006)
V$NKX22_01
0.850
0.982
NKX2-2
M10682_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NKX2B_Q3_01
0.850
0.982
NKX2-2
M10683_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NKX2B_Q3
0.850
0.982
Nkx2-9
M00520_2.00
Mus musculus
NNNRAGDRBN
NVYHCTYNNN
PBM
Berger et al.(2008)
Nkx2-9_3082
0.843
0.912
Nkx2-9
M00800_2.00
Mus musculus
NNRAGDRBNN
NNVYHCTYNN
PBM
Weirauch et al.(2013)
pTH2842
0.843
0.912
Nkx2-9
M09215_2.00
Mus musculus
BTCAAGKRB
VYMCTTGAV
Misc
Kulakovskiy et al.(2013)
NKX28_MOUSE.H11MO.0.C
0.843
0.912
ceh-22
M00376_2.00
Caenorhabditis elegans
WBRAGTRBNN
NNVYACTYVW
PBM
Berger et al.(2006)
Ceh-22
0.823
0.877
NKX2-8
M00302_2.00
Homo sapiens
NNRAGDRB
VYHCTYNN
PBM
Barrera et al.(2016)
NKX2-8_REF
0.811
0.912
NKX2-8
M05149_2.00
Homo sapiens
BTSRAGTGBN
NVCACTYSAV
SELEX
Yin et al.(2017)
NKX2-8_FL_HT-SELEX
0.811
0.912
NKX2-8
M09145_2.00
Homo sapiens
BTCAAGKRB
VYMCTTGAV
Misc
Kulakovskiy et al.(2013)
NKX28_HUMAN.H11MO.0.C
0.811
0.912
NKX2-8
M05150_2.00
Homo sapiens
GCARTAACGACATC
GATGTCGTTAYTGC
SELEX
Yin et al.(2017)
NKX2-8_FL_Methyl-HT-SELEX_1
0.811
0.912
NKX2-8
M05151_2.00
Homo sapiens
BTSAAGTGBN
NVCACTTSAV
SELEX
Yin et al.(2017)
NKX2-8_FL_Methyl-HT-SELEX_2
0.811
0.912
NKX2-8
M05152_2.00
Homo sapiens
BTBAACGAB
VTCGTTVAV
SELEX
Yin et al.(2017)
NKX2-8_FL_Methyl-HT-SELEX_3
0.811
0.912
NKX2-8
M00301_2.00
Homo sapiens
NNRAKDRB
VYHMTYNN
PBM
Barrera et al.(2016)
NKX2-8_A94T
0.811
0.895
scro
M03854_2.00
Drosophila melanogaster
NNBRMGTGB
VCACKYVNN
SELEX
Nitta et al.(2015)
scro_1
0.799
0.895
ceh-24
M02181_2.00
Caenorhabditis elegans
NNRAKWRNN
NNYWMTYNN
PBM
Weirauch et al.(2014)
pTH6327
0.784
0.825
Nkx2-1
M00385_2.00
Mus musculus
NNRAGDRN
NYHCTYNN
PBM
Berger et al.(2008)
Titf1_1722
0.782
0.877
Nkx2-4
M00514_2.00
Mus musculus
NNRAGDRBNN
NNVYHCTYNN
PBM
Berger et al.(2008)
Nkx2-4_3074
0.782
0.877
NKX2-1
M09146_2.00
Homo sapiens
BTKGAGWGBN
NVCWCTCMAV
Misc
Kulakovskiy et al.(2013)
NKX21_HUMAN.H11MO.0.A
0.782
0.877
Nkx2-1
M09171_2.00
Mus musculus
NBTKGAGWGB
VCWCTCMAVN
Misc
Kulakovskiy et al.(2013)
NKX21_MOUSE.H11MO.0.A
0.782
0.877
Nkx2-1
M09563_2.00
Mus musculus
BTBRAGWGBH
DVCWCTYVAV
Misc
Heinz et al.(2010)
LungAC-Nkx2.1_GSE43252
0.782
0.877
NKX2-1
M10694_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TITF1_Q3
0.782
0.877
NKX2-1
M10695_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TTF1_Q5_01
0.782
0.877
NKX2-1
M10696_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TTF1_Q5
0.782
0.877
NKX2-1
M10697_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TTF1_Q6
0.782
0.877
NKX2-5
M00323_2.00
Homo sapiens
NWYAAGTGSNN
NNSCACTTRWN
PBM
Barrera et al.(2016)
NKX2-5_REF
0.742
0.789
Nkx2-5
M00404_2.00
Mus musculus
NNNRAGDRBN
NVYHCTYNNN
PBM
Berger et al.(2008)
Nkx2-5_3436
0.742
0.789
NKX2-5
M05346_2.00
Homo sapiens
BHYAAGTGBN
NVCACTTRDV
SELEX
Yin et al.(2017)
NKX2-5_FL_HT-SELEX
0.742
0.789
Nkx2-5
M02686_2.00
Mus musculus
WTAAKWK
MWMTTAW
SELEX
Mathelier et al.(2014)
MA0063.1
0.742
0.789
Nkx2-5
M08136_2.00
Mus musculus
SYTGAGWGSYH
DRSCWCTCARS
ChIP-seq
Mathelier et al.(2014)
MA0503.1
0.742
0.789
NKX2-5
M09163_2.00
Homo sapiens
BKRAGWGV
BCWCTYMV
Misc
Kulakovskiy et al.(2013)
NKX25_HUMAN.H11MO.0.B
0.742
0.789
Nkx2-5
M09177_2.00
Mus musculus
NBYBRAGTGS
SCACTYVRVN
Misc
Kulakovskiy et al.(2013)
NKX25_MOUSE.H11MO.0.A
0.742
0.789
Nkx2-5
M09567_2.00
Mus musculus
HBRAGWGBNN
NNVCWCTYVD
Misc
Heinz et al.(2010)
HL1-Nkx2.5.biotin_GSE21529
0.742
0.789
NKX2-5
M10742_2.00
Homo sapiens
TYAAGTG
CACTTRA
Transfac
Matys et al.(2006)
V$NKX25_01
0.742
0.789
NKX2-5
M10743_2.00
Homo sapiens
CWTAATTV
BAATTAWG
Transfac
Matys et al.(2006)
V$NKX25_02
0.742
0.789
NKX2-5
M10744_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NKX25_Q5
0.742
0.789
NKX2-5
M10745_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NKX25_Q6
0.742
0.789
NKX2-5
M05347_2.00
Homo sapiens
BTYAAGTGGN
NCCACTTRAV
SELEX
Yin et al.(2017)
NKX2-5_FL_Methyl-HT-SELEX_1
0.742
0.789
NKX2-5
M05348_2.00
Homo sapiens
BTYAACGAB
VTCGTTRAV
SELEX
Yin et al.(2017)
NKX2-5_FL_Methyl-HT-SELEX_2
0.742
0.789
NKX2-5
M00322_2.00
Homo sapiens
NNNRNNN
NNNYNNN
PBM
Barrera et al.(2016)
NKX2-5_R190C
0.742
0.772
NKX2-5
M00324_2.00
Homo sapiens
NHNNNNN
NNNNNDN
PBM
Barrera et al.(2016)
NKX2-5_T178M
0.742
0.772
Nkx2-3
M00497_2.00
Mus musculus
NNRAGDRNN
NNYHCTYNN
PBM
Berger et al.(2008)
Nkx2-3_3435
0.741
0.807
NKX2-3
M05042_2.00
Homo sapiens
NNBAAGTGBN
NVCACTTVNN
SELEX
Yin et al.(2017)
NKX2-3_eDBD_HT-SELEX
0.741
0.807
NKX2-3
M05045_2.00
Homo sapiens
BNBAAGTGBN
NVCACTTVNV
SELEX
Yin et al.(2017)
NKX2-3_FL_HT-SELEX
0.741
0.807
NKX2-3
M05043_2.00
Homo sapiens
BNBAAGTGBN
NVCACTTVNV
SELEX
Yin et al.(2017)
NKX2-3_eDBD_Methyl-HT-SELEX_1
0.741
0.807
NKX2-3
M05044_2.00
Homo sapiens
SDYAACGHB
VDCGTTRHS
SELEX
Yin et al.(2017)
NKX2-3_eDBD_Methyl-HT-SELEX_2
0.741
0.807
NKX2-3
M05046_2.00
Homo sapiens
BNBAAGTGBN
NVCACTTVNV
SELEX
Yin et al.(2017)
NKX2-3_FL_Methyl-HT-SELEX_1
0.741
0.807
NKX2-3
M05047_2.00
Homo sapiens
SWYAACSHB
VDSGTTRWS
SELEX
Yin et al.(2017)
NKX2-3_FL_Methyl-HT-SELEX_2
0.741
0.807
NKX2-5
M00321_2.00
Homo sapiens
HNAAGTRBNN
NNVYACTTND
PBM
Barrera et al.(2016)
NKX2-5_R161P
0.737
0.772
ceh-28
M08210_2.00
Caenorhabditis elegans
AATCGATW
WATCGATT
ChIP-seq
Contrino et al.(2012)
Mw138
0.736
0.649
Nkx2-6
M00496_2.00
Mus musculus
HYAAGTRBNN
NNVYACTTRD
PBM
Berger et al.(2008)
Nkx2-6_3437
0.718
0.754
tin
M00559_2.00
Drosophila melanogaster
NWYAAGTGGNN
NNCCACTTRWN
PBM
Busser et al.(2012a)
Tin
0.718
0.632
tin
M03809_2.00
Drosophila melanogaster
BTYAAGTGSN
NSCACTTRAV
SELEX
Nitta et al.(2015)
tin_1
0.718
0.632
tin
M06284_2.00
Drosophila melanogaster
BTYAAGTG
CACTTRAV
B1H
Zhu et al.(2011)
Tin_Cell_FBgn0004110
0.718
0.632
tin
M06285_2.00
Drosophila melanogaster
BCTCAAGTGSVN
NBSCACTTGAGV
B1H
Zhu et al.(2011)
tin_FlyReg_FBgn0004110
0.718
0.632
tin
M06286_2.00
Drosophila melanogaster
BWYAAGTR
YACTTRWV
B1H
Zhu et al.(2011)
Tin_SOLEXA_FBgn0004110
0.718
0.632
tin
M08421_2.00
Drosophila melanogaster
DBTCRAGTGS
SCACTYGAVH
ChIP-chip
Mathelier et al.(2014)
MA0247.2
0.718
0.632
NKX2-5
M00320_2.00
Homo sapiens
NHBAAKWRN
NYWMTTVDN
PBM
Barrera et al.(2016)
NKX2-5_K183E
0.709
0.772
Q24782_9CNID
M02206_2.00
Eleutheria dichotoma
TTAATTAA
TTAATTAA
PBM
Weirauch et al.(2014)
pTH5486
0.613
0.491
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AQUA008668-PA
Homeodomain
483
539
RKRRVLFSKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYKTKR
Links
Other
Homeodomain
family TFs
Other
Anopheles quadriannulatus
TFs
821 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
XP_002165090.1
Hydra magnipapillata
XP_002165090.1
N
XP_002162420.1
Hydra magnipapillata
XP_002162420.1
N
XP_002162644.1
Hydra magnipapillata
XP_002162644.1
N
XP_002163066.1
Hydra magnipapillata
XP_002163066.1
N
XP_002163144.1
Hydra magnipapillata
XP_002163144.1
N
XP_002163280.1
Hydra magnipapillata
XP_002163280.1
N
XP_002163476.1
Hydra magnipapillata
XP_002163476.1
N
XP_002164079.1
Hydra magnipapillata
XP_002164079.1
N
XP_002164334.1
Hydra magnipapillata
XP_002164334.1
N
XP_002164436.1
Hydra magnipapillata
XP_002164436.1
N
XP_002164515.1
Hydra magnipapillata
XP_002164515.1
N
XP_002164950.1
Hydra magnipapillata
XP_002164950.1
N
XP_002162415.1
Hydra magnipapillata
XP_002162415.1
N
XP_002165094.1
Hydra magnipapillata
XP_002165094.1
N
XP_002165096.1
Hydra magnipapillata
XP_002165096.1
N
XP_002166625.1
Hydra magnipapillata
XP_002166625.1
N
XP_002166730.1
Hydra magnipapillata
XP_002166730.1
N
XP_002166851.1
Hydra magnipapillata
XP_002166851.1
N
XP_002166948.1
Hydra magnipapillata
XP_002166948.1
N
XP_002167036.1
Hydra magnipapillata
XP_002167036.1
N
XP_002167896.1
Hydra magnipapillata
XP_002167896.1
N
XP_002168024.1
Hydra magnipapillata
XP_002168024.1
N
XP_002168340.1
Hydra magnipapillata
XP_002168340.1
N
XP_002170421.1
Hydra magnipapillata
XP_002170421.1
N
XP_002158342.1
Hydra magnipapillata
XP_002158342.1
N
XP_002154853.1
Hydra magnipapillata
XP_002154853.1
N
XP_002155192.1
Hydra magnipapillata
XP_002155192.1
N
XP_002155279.1
Hydra magnipapillata
XP_002155279.1
N
XP_002155711.1
Hydra magnipapillata
XP_002155711.1
N
XP_002155761.1
Hydra magnipapillata
XP_002155761.1
N
XP_002155809.1
Hydra magnipapillata
XP_002155809.1
N
XP_002156150.1
Hydra magnipapillata
XP_002156150.1
N
XP_002156495.1
Hydra magnipapillata
XP_002156495.1
N
XP_002156543.1
Hydra magnipapillata
XP_002156543.1
N
XP_002157104.1
Hydra magnipapillata
XP_002157104.1
N
XP_002157245.1
Hydra magnipapillata
XP_002157245.1
N
XP_002154129.1
Hydra magnipapillata
XP_002154129.1
N
XP_002158687.1
Hydra magnipapillata
XP_002158687.1
N
XP_002158960.1
Hydra magnipapillata
XP_002158960.1
N
XP_002160437.1
Hydra magnipapillata
XP_002160437.1
N
XP_002160801.1
Hydra magnipapillata
XP_002160801.1
N
XP_002161179.1
Hydra magnipapillata
XP_002161179.1
N
XP_002161349.1
Hydra magnipapillata
XP_002161349.1
N
XP_002161759.1
Hydra magnipapillata
XP_002161759.1
N
XP_002161786.1
Hydra magnipapillata
XP_002161786.1
N
XP_002161840.1
Hydra magnipapillata
XP_002161840.1
N
XP_002162389.1
Hydra magnipapillata
XP_002162389.1
N
XP_002162414.1
Hydra magnipapillata
XP_002162414.1
N