D915_03380 (Fasciola hepatica)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 D915_03380 T233422_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MEIS3
M03093_2.00 		Homo sapiens
DTGACANN
NNTGTCAH		 SELEX
Jolma et al.(2013)
MEIS3_1 		0.784 0.600
MEIS3
M03094_2.00 		Homo sapiens
TGACAGSTGTCA
TGACASCTGTCA		 SELEX
Jolma et al.(2013)
MEIS3_2 		0.784 0.600
MEIS3
M04951_2.00 		Homo sapiens
TGWCABVTGWCA
TGWCABVTGWCA		 SELEX
Yin et al.(2017)
MEIS3_eDBD_HT-SELEX 		0.784 0.600
MEIS3
M04952_2.00 		Homo sapiens
YGWCABVTGWCR
YGWCABVTGWCR		 SELEX
Yin et al.(2017)
MEIS3_eDBD_Methyl-HT-SELEX 		0.784 0.600
Q5EVH4_OIKDI
M02227_2.00 		Oikopleura dioica
NTGACAKN
NMTGTCAN		 PBM
Weirauch et al.(2014)
pTH6041 		0.721 0.575
KNAT7
M01064_2.00 		Arabidopsis thaliana
TGACRKST
ASMYGTCA		 PBM
Sullivan et al.(2014)
pTH9798 		0.648 0.450
KNAT4
M01238_2.00 		Arabidopsis thaliana
NNGACNNNN
NNNNGTCNN		 PBM
Lambert et al.(2019)
pTH9968 		0.645 0.475
KNAT3
M02051_2.00 		Arabidopsis thaliana
NNNGACVBNN
NNVBGTCNNN		 PBM
Weirauch et al.(2014)
pTH7600 		0.645 0.475
ATH1
M10627_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATH1_01 		0.638 0.500
HOS66
M02156_2.00 		Oryza sativa
NNNNDHNN
NNDHNNNN		 PBM
Weirauch et al.(2014)
pTH8332 		0.632 0.450
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
D915_03380 Homeodomain 159 198

Links

Other Homeodomain family TFs
Other Fasciola hepatica TFs

1253 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
maker-pir_contig_1153-fgenesh-gene-0.2 Pythium irregulare maker-pir_contig_1153-fgenesh-gene-0.2 I 0.000
F443_16825 Phytophthora parasitica F443_16825 N 0.000
maker-pag1_scaffold_178-snap-gene-0.14 Pythium aphanidermatum maker-pag1_scaffold_178-snap-gene-0.14 N 0.000
maker-par_contig_4858-fgenesh-gene-0.0 Pythium arrhenomanes maker-par_contig_4858-fgenesh-gene-0.0 N 0.000
Phyra84542 Phytophthora ramorum Phyra84542 N 0.000
Physo143987 Phytophthora sojae Physo143987 N 0.000
PITG_17567 Phytophthora infestans PITG_17567 N 0.000
PYU1_G006458 Pythium ultimum PYU1_G006458 N 0.000
estExt_fgenesh1_pm.C_90143 Phytophthora capsici estExt_fgenesh1_pm.C_90143 N 0.000