L889_g30093 (Steinernema feltiae)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 L889_g30093 T234660_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PBX2
M08134_2.00 		Homo sapiens
NWGAKTGACABN
NVTGTCAMTCWN		 ChIP-seq
Mathelier et al.(2014)
MA1113.1 		0.776 0.702
PBX2
M09165_2.00 		Homo sapiens
KRVHKTGATTGAWKN
NMWTCAATCAMDBYM		 Misc
Kulakovskiy et al.(2013)
PBX2_HUMAN.H11MO.0.C 		0.776 0.702
Pbx2
M09199_2.00 		Mus musculus
KRVHKTGATTGAWKN
NMWTCAATCAMDBYM		 Misc
Kulakovskiy et al.(2013)
PBX2_MOUSE.H11MO.0.C 		0.776 0.702
pbx4
M02110_2.00 		Tetraodon nigroviridis
TTGAYGDV
BHCRTCAA		 PBM
Weirauch et al.(2014)
pTH6425 		0.776 0.684
Pbx3
M09205_2.00 		Mus musculus
BBBTGATTGRYNDN
NHNRYCAATCAVVV		 Misc
Kulakovskiy et al.(2013)
PBX3_MOUSE.H11MO.0.A 		0.776 0.684
Pbx1
M00513_2.00 		Mus musculus
NNDKANNNN
NNNNTMHNN		 PBM
Berger et al.(2008)
Pbx1_3203 		0.776 0.667
PBX1
M05362_2.00 		Homo sapiens
NTGATKGAYR
YRTCMATCAN		 SELEX
Yin et al.(2017)
PBX1_eDBD_HT-SELEX 		0.776 0.667
PBX1
M05364_2.00 		Homo sapiens
DTGMTKGRYN
NRYCMAKCAH		 SELEX
Yin et al.(2017)
PBX1_FL_HT-SELEX 		0.776 0.667
PBX1
M02685_2.00 		Homo sapiens
WWTGATTGATND
HNATCAATCAWW		 SELEX
Mathelier et al.(2014)
MA0070.1 		0.776 0.667
PBX1
M09164_2.00 		Homo sapiens
DGABTGRCRG
CYGYCAVTCH		 Misc
Kulakovskiy et al.(2013)
PBX1_HUMAN.H11MO.0.A 		0.776 0.667
PBX1
M09561_2.00 		Homo sapiens
TGABTGACAGSC
GSCTGTCAVTCA		 Misc
Heinz et al.(2010)
MCF7-PBX1_GSE28007 		0.776 0.667
PBX1
M10748_2.00 		Homo sapiens
WTKATTRDT
AHYAATMAW		 Transfac
Matys et al.(2006)
V$PBX1_01 		0.776 0.667
PBX1
M10749_2.00 		Homo sapiens
DNHTTGATTGATKDB
VHMATCAATCAADNH		 Transfac
Matys et al.(2006)
V$PBX1_02 		0.776 0.667
PBX1
M10750_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PBX1_03 		0.776 0.667
PBX1
M10751_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PBX1_05 		0.776 0.667
PBX1
M10752_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PBX1_10 		0.776 0.667
PBX1
M10753_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PBX1_Q3 		0.776 0.667
PBX1
M05363_2.00 		Homo sapiens
DTGAKKGAYG
CRTCMMTCAH		 SELEX
Yin et al.(2017)
PBX1_eDBD_Methyl-HT-SELEX 		0.776 0.667
PBX1
M05365_2.00 		Homo sapiens
MRTCAATCMH
DKGATTGAYK		 SELEX
Yin et al.(2017)
PBX1_FL_Methyl-HT-SELEX 		0.776 0.667
exd
M06487_2.00 		Drosophila melanogaster
YRTCAAAN
NTTTGAYR		 B1H
Mathelier et al.(2014)
MA0222.1 		0.731 0.667
exd
M06243_2.00 		Drosophila melanogaster
YRTCAAAN
NTTTGAYR		 B1H
Zhu et al.(2011)
Exd_Cell_FBgn0000611 		0.731 0.667
exd
M06244_2.00 		Drosophila melanogaster
NWRNWYNAAA
TTTNRWNYWN		 B1H
Zhu et al.(2011)
exd_FlyReg_FBgn0000611 		0.731 0.667
exd
M06245_2.00 		Drosophila melanogaster
NDTGAYRW
WYRTCAHN		 B1H
Zhu et al.(2011)
exd_SOLEXA_2_FBgn0000611 		0.731 0.667
exd
M06246_2.00 		Drosophila melanogaster
NNDTGAYR
YRTCAHNN		 B1H
Zhu et al.(2011)
Exd_SOLEXA_FBgn0000611 		0.731 0.667
PBX4
M00277_2.00 		Homo sapiens
NNDDWHDNNN
NNNHDWHHNN		 PBM
Barrera et al.(2016)
PBX4_REF 		0.729 0.649
PBX4
M10649_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PBX4_01 		0.729 0.649
CBG10835
M01243_2.00 		Caenorhabditis briggsae
NNTKAYDNN
NNHRTMANN		 PBM
Lambert et al.(2019)
pTH11444 		0.660 0.526
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
L889_g30093.t1 Homeodomain 203 258
L889_g30093.t2 Homeodomain 206 265

Links

Other Homeodomain family TFs
Other Steinernema feltiae TFs

431 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
vad-2 Neurospora crassa NCU02094 D
CIMG_04520 Coccidioides immitis CIMG_04520 I
SNOG_00452 Stagonospora nodorum SNOG_00452 I
A1O1_06908 Capronia coronata A1O1_06908 I
A1O3_10521 Capronia epimyces A1O3_10521 I
A1O9_06785 Exophiala aquamarina A1O9_06785 I
ACRE_014300 Acremonium chrysogenum ACRE_014300 I
AOL_s00140g62 Arthrobotrys oligospora AOL_s00140g62 I
BBA_01414 Beauveria bassiana BBA_01414 I
Bcin05g02780 Botrytis cinerea Bcin05g02780 I
BDDG_07206 Blastomyces dermatitidis BDDG_07206 I
BGHDH14_bgh03098 Blumeria graminis BGHDH14_bgh03098 I
ACLA_091060 Aspergillus clavatus CADACLAG00008741 I
CADAFLAG00008913 Aspergillus flavus CADAFLAG00008913 I
AFUA_2G03460 Aspergillus fumigatus CADAFUAG00003363 I
CADANGAG00006067 Aspergillus niger CADANGAG00006067 I
ANIA_04486 Aspergillus nidulans CADANIAG00005959 I
CADAORAG00011392 Aspergillus oryzae CADAORAG00011392 I
ATEG_09543 Aspergillus terreus CADATEAG00004294 I
NFIA_035810 Neosartorya fischeri CADNFIAG00003215 I
CCM_00085 Cordyceps militaris CCM_00085 I
CFIO01_08387 Colletotrichum fioriniae CFIO01_08387 I
CGGC5_8879 Colletotrichum gloeosporioides CGGC5_8879 I
CH063_09643 Colletotrichum higginsianum CH063_09643 I
CMQ_1121 Grosmannia clavigera CMQ_1121 I
Cob_13285 Colletotrichum orbiculare Cob_13285 I
COCC4DRAFT_53548 Bipolaris maydis COCC4DRAFT_53548 I
COCCADRAFT_37638 Bipolaris zeicola COCCADRAFT_37638 I
COCMIDRAFT_36857 Bipolaris oryzae COCMIDRAFT_36857 I
COCSADRAFT_116952 Bipolaris sorokiniana COCSADRAFT_116952 I
COCVIDRAFT_97328 Bipolaris victoriae COCVIDRAFT_97328 I
CPC735_072600 Coccidioides posadasii CPC735_072600 I
CPUR_00123 Claviceps purpurea CPUR_00123 I
CSUB01_06778 Colletotrichum sublineola CSUB01_06778 I
CTHT_0058750 Chaetomium thermophilum CTHT_0058750 I
DRE_07274 Drechslerella stenobrocha DRE_07274 I
EPUS_07641 Endocarpon pusillum EPUS_07641 I
EURHEDRAFT_400169 Aspergillus ruber EURHEDRAFT_400169 I
EV44_g6013 Erysiphe necator EV44_g6013 I
F503_03035 Ophiostoma piceae uamh F503_03035 I
FFUJ_00519 Fusarium fujikuroi FFUJ_00519 I
FGRRES_00719 Fusarium graminearum FGRRES_00719 I
FOXG_01048 Fusarium oxysporum FOXG_01048 I
FPSE_00332 Fusarium pseudograminearum FPSE_00332 I
GGTG_00361 Gaeumannomyces graminis GGTG_00361 I
GLRG_00601 Colletotrichum graminicola GLRG_00601 I
GMDG_07312 Pseudogymnoascus destructans GMDG_07312 I
H101_06817 Trichophyton interdigitale H101_06817 I
H102_02066 Trichophyton rubrum H102_02066 I
H105_02085 Trichophyton soudanense H105_02085 I
HCBG_00443 Histoplasma capsulatum HCBG_00443 I
HMPREF1120_04416 Exophiala dermatitidis HMPREF1120_04416 I
HMPREF1624_07062 Sporothrix schenckii HMPREF1624_07062 I
LEMA_P067560.1 Leptosphaeria maculans LEMA_P067560.1 I
MAJ_07134 Metarhizium majus MAJ_07134 I
MAPG_07499 Magnaporthe poae MAPG_07499 I
MBM_03894 Marssonina brunnea MBM_03894 I
MBR_08359 Metarhizium brunneum MBR_08359 I
MGG_00672 Magnaporthe oryzae MGG_00672 I
MGU_03630 Metarhizium guizhouense MGU_03630 I
MGYG_02745 Microsporum gypseum MGYG_02745 I
MYCTH_2294353 Myceliophthora thermophila MYCTH_2294353 I
NechaG31073 Fusarium solani NechaG31073 I
NEUTE1DRAFT_149383 Neurospora tetrasperma NEUTE1DRAFT_149383 I
OIDMADRAFT_128988 Oidiodendron maius OIDMADRAFT_128988 I
OIDMADRAFT_129597 Oidiodendron maius OIDMADRAFT_129597 I
PAAG_06733 Paracoccidioides sp lutzii PAAG_06733 I
PABG_01031 Paracoccidioides brasiliensis PABG_01031 I
PCH_Pc18g04740 Penicillium rubens PCH_Pc18g04740 I
PDE_05300 Penicillium oxalicum PDE_05300 I
PDIP_71520 Penicillium digitatum PDIP_71520 I
PEX1_086470 Penicillium expansum PEX1_086470 I
PFICI_13275 Pestalotiopsis fici PFICI_13275 I
PITC_092050 Penicillium italicum PITC_092050 I
PMAA_003840 Talaromyces marneffei PMAA_003840 I
PMAA_046980 Talaromyces marneffei PMAA_046980 I
PTRG_10320 Pyrenophora triticirepentis PTRG_10320 I
PTT_13781 Pyrenophora teres PTT_13781 I
PV04_02143 Capronia semiimmersa PV04_02143 I
PV05_07550 Exophiala xenobiotica PV05_07550 I
PV06_07805 Exophiala oligosperma PV06_07805 I
PV07_02432 Cladophialophora immunda PV07_02432 I
PV08_03313 Exophiala spinifera PV08_03313 I
PV10_03556 Exophiala mesophila PV10_03556 I
PV11_03679 Exophiala sideris PV11_03679 I
PVAR5_2013 Byssochlamys spectabilis PVAR5_2013 I
S40285_06808 Stachybotrys chlorohalonata S40285_06808 I
S40288_06943 Stachybotrys chartarum S40288_06943 I
SAPIO_CDS7657 Scedosporium apiospermum SAPIO_CDS7657 I
SBOR_0836 Sclerotinia borealis SBOR_0836 I
SETTUDRAFT_134649 Setosphaeria turcica SETTUDRAFT_134649 I
SMAC_04990 Sordaria macrospora SMAC_04990 I
SNOG_00452 Phaeosphaeria nodorum SNOG_00452 I
SPBR_06677 Sporothrix brasiliensis SPBR_06677 I
SS1G_05760 Sclerotinia sclerotiorum SS1G_05760 I
TESG_05591 Trichophyton tonsurans TESG_05591 I
THITE_2121261 Thielavia terrestris THITE_2121261 I
TRIATDRAFT_80549 Trichoderma atroviride TRIATDRAFT_80549 I
TRIREDRAFT_108872 Trichoderma reesei TRIREDRAFT_108872 I
TRIVIDRAFT_33222 Trichoderma virens TRIVIDRAFT_33222 I
TSTA_036550 Talaromyces stipitatus TSTA_036550 I
TSTA_101630 Talaromyces stipitatus TSTA_101630 I
UV8b_1944 Ustilaginoidea virens UV8b_1944 I
V499_06303 Pseudogymnoascus pannorum V499_06303 I
VHEMI05022 Torrubiella hemipterigena VHEMI05022 I
W97_06511 Coniosporium apollinis W97_06511 I
X797_006259 Metarhizium robertsii X797_006259 I
Z517_00029 Fonsecaea pedrosoi Z517_00029 I
Z518_02832 Rhinocladiella mackenziei Z518_02832 I
Z519_12680 Cladophialophora bantiana Z519_12680 I
e_gw1.1.122.1 Nectria haematococca e_gw1.1.122.1 I
estExt_Genewise1Plus.C_20576 Neurospora discreta estExt_Genewise1Plus.C_20576 I
estExt_Genewise1Plus.C_270143 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_270143 I
fgenesh1_pm.00009_#_164 Aspergillus carbonarius fgenesh1_pm.00009_#_164 I
gw1.6.911.1 Cryphonectria parasitica gw1.6.911.1 I
Pc18g04740 Penicillium chrysogenum Pc18g04740 I
PMAA_003840 Penicillium marneffei PMAA_003840 I
PMAA_046980 Penicillium marneffei PMAA_046980 I