CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NECAME_14560
(
Necator americanus
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
NECAME_14560
T235380_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
VSX1
M03087_2.00
Homo sapiens
YTAATTAN
NTAATTAR
SELEX
Jolma et al.(2013)
VSX1_1
0.799
0.565
VSX1
M03088_2.00
Homo sapiens
NNYAATTRRBN
NVYYAATTRNN
SELEX
Jolma et al.(2013)
VSX1_2
0.799
0.565
VSX1
M04941_2.00
Homo sapiens
YYAATTRN
NYAATTRR
SELEX
Yin et al.(2017)
VSX1_eDBD_HT-SELEX
0.799
0.565
VSX1
M04944_2.00
Homo sapiens
NTAATTRS
SYAATTAN
SELEX
Yin et al.(2017)
VSX1_FL_HT-SELEX
0.799
0.565
VSX1
M05869_2.00
Homo sapiens
DGCTAATTAN
NTAATTAGCH
SMiLE-seq
Isakova et al.(2017)
VSX1
0.799
0.565
VSX1
M04942_2.00
Homo sapiens
NTAAYGMN
NKCRTTAN
SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_1
0.799
0.565
VSX1
M04943_2.00
Homo sapiens
YYAATTRN
NYAATTRR
SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_2
0.799
0.565
VSX1
M04945_2.00
Homo sapiens
NTAATTRG
CYAATTAN
SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_1
0.799
0.565
VSX1
M04946_2.00
Homo sapiens
NTAAYGAN
NTCRTTAN
SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_2
0.799
0.565
VAX1
M03168_2.00
Homo sapiens
YTAATKAN
NTMATTAR
SELEX
Jolma et al.(2013)
VAX1_1
0.732
0.370
VAX1
M05182_2.00
Homo sapiens
BTAATTRN
NYAATTAV
SELEX
Yin et al.(2017)
VAX1_eDBD_HT-SELEX
0.732
0.370
VAX1
M05183_2.00
Homo sapiens
BTMATKRN
NYMATKAV
SELEX
Yin et al.(2017)
VAX1_eDBD_Methyl-HT-SELEX
0.732
0.370
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
NECAME_14560
Homeodomain
40
91
RRTRTNFSGWQLEELESAFEVRDDFQASHYPDVFMREALALRLDLLESRVQY
Links
Other
Homeodomain
family TFs
Other
Necator americanus
TFs
1241 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ZNF134
Homo sapiens
ENSG00000213762
D
0.000
ZNF134
Bos taurus
ENSBTAG00000038240
I
0.000
ZNF134
Canis familiaris
ENSCAFG00000031283
I
0.000
ENSCJAG00000000037
Callithrix jacchus
ENSCJAG00000000037
I
0.000
ENSCSAG00000001625
Chlorocebus sabaeus
ENSCSAG00000001625
I
0.000
ZNF134
Felis catus
ENSFCAG00000030721
I
0.000
ZNF211
Macaca mulatta
ENSMMUG00000005333
I
0.000
ENSMPUG00000006246
Mustela putorius furo
ENSMPUG00000006246
I
0.000
ENSNLEG00000010985
Nomascus leucogenys
ENSNLEG00000010985
I
0.000
ZNF134
Oryctolagus cuniculus
ENSOCUG00000029572
I
0.000
ZNF134
Otolemur garnettii
ENSOGAG00000029871
I
0.000
ZNF134
Pan troglodytes
ENSPTRG00000033996
I
0.000
ZNF134
Sus scrofa
ENSSSCG00000003984
I
0.000
ZNF134
Tursiops truncatus
ENSTTRG00000004316
I
0.000
ENSP00000379464
Macaca fascicularis
ENSP00000379464
I
0.000
Myotis_brandtii_ZNF134_10001928
Myotis brandtii
Myotis_brandtii_ZNF134_10001928
I
0.000