SBAD_0000661201 (Soboliphyme baturini)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 SBAD_0000661201 T235914_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
VAX1
M03168_2.00 		Homo sapiens
YTAATKAN
NTMATTAR		 SELEX
Jolma et al.(2013)
VAX1_1 		0.677 0.263
VAX1
M05182_2.00 		Homo sapiens
BTAATTRN
NYAATTAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_HT-SELEX 		0.677 0.263
VAX1
M05183_2.00 		Homo sapiens
BTMATKRN
NYMATKAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_Methyl-HT-SELEX 		0.677 0.263
VSX1
M03087_2.00 		Homo sapiens
YTAATTAN
NTAATTAR		 SELEX
Jolma et al.(2013)
VSX1_1 		0.617 0.289
VSX1
M03088_2.00 		Homo sapiens
NNYAATTRRBN
NVYYAATTRNN		 SELEX
Jolma et al.(2013)
VSX1_2 		0.617 0.289
VSX1
M04941_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_HT-SELEX 		0.617 0.289
VSX1
M04944_2.00 		Homo sapiens
NTAATTRS
SYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_HT-SELEX 		0.617 0.289
VSX1
M05869_2.00 		Homo sapiens
DGCTAATTAN
NTAATTAGCH		 SMiLE-seq
Isakova et al.(2017)
VSX1 		0.617 0.289
VSX1
M04942_2.00 		Homo sapiens
NTAAYGMN
NKCRTTAN		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_1 		0.617 0.289
VSX1
M04943_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_2 		0.617 0.289
VSX1
M04945_2.00 		Homo sapiens
NTAATTRG
CYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_1 		0.617 0.289
VSX1
M04946_2.00 		Homo sapiens
NTAAYGAN
NTCRTTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_2 		0.617 0.289
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SBAD_0000661201-mRNA-1 Homeodomain 125 165

Links

Other Homeodomain family TFs
Other Soboliphyme baturini TFs

994 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZNF879 Homo sapiens ENSG00000234284 D 0.000
ZNF879 Loxodonta africana ENSLAFG00000018662 I 0.000
ENSP00000414887 Macaca fascicularis ENSP00000414887 I 0.000
ENSP00000341151-D16 Bos grunniens ENSP00000341151-D16 I 0.000
Zfp879 Rattus norvegicus ENSRNOG00000030517 I 0.000
ZNF879 Pan troglodytes ENSPTRG00000041282 I 0.000
ENSPPYG00000029650 Pongo abelii ENSPPYG00000029650 I 0.000
ENSPANG00000014426 Papio anubis ENSPANG00000014426 I 0.000
ZNF879 Otolemur garnettii ENSOGAG00000032797 I 0.000
ENSNLEG00000001439 Nomascus leucogenys ENSNLEG00000001439 I 0.000
Zfp879 Mus musculus ENSMUSG00000044296 I 0.000
ENSMPUG00000000701 Mustela putorius furo ENSMPUG00000000701 I 0.000
ZNF879 Macaca mulatta ENSMMUG00000002484 I 0.000
ENSAMEG00000009025 Ailuropoda melanoleuca ENSAMEG00000009025 I 0.000
ZNF879 Gorilla gorilla ENSGGOG00000023048 I 0.000
ZNF879 Felis catus ENSFCAG00000025356 I 0.000
ZNF879 Echinops telfairi ENSETEG00000004774 I 0.000
ZNF879 Erinaceus europaeus ENSEEUG00000011407 I 0.000
ZNF879 Equus caballus ENSECAG00000023471 I 0.000
ZNF354C Dasypus novemcinctus ENSDNOG00000011675 I 0.000
ENSCSAG00000008491 Chlorocebus sabaeus ENSCSAG00000008491 I 0.000
ZNF879 Callithrix jacchus ENSCJAG00000018904 I 0.000
ZNF879 Canis familiaris ENSCAFG00000030461 I 0.000