TsM_000683000 (Taenia solium)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 TsM_000683000 T237063_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PBX3
M08132_2.00 		Homo sapiens
NNNTGAGTGACAGSNNN
NNNSCTGTCACTCANNN		 ChIP-seq
Mathelier et al.(2014)
MA1114.1 		0.828 0.883
PBX3
M07971_2.00 		Homo sapiens
NNBDRCCAATSRVVD
HBBYSATTGGYHVNN		 ChIP-seq
Gerstein et al.(2012)
GM12878_PBX3_HudsonAlpha 		0.828 0.883
PBX3
M09155_2.00 		Homo sapiens
DGABKGRCRGB
VCYGYCMVTCH		 Misc
Kulakovskiy et al.(2013)
PBX3_HUMAN.H11MO.0.A 		0.828 0.883
PBX3
M09560_2.00 		Homo sapiens
NTGABTGACAGB
VCTGTCAVTCAN		 Misc
Heinz et al.(2010)
GM12878-PBX3_GSE32465 		0.828 0.883
PBX3
M10732_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PBX3_02 		0.828 0.883
PBX3
M10733_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PBX3_03 		0.828 0.883
PBX3
M10734_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PBX3_04 		0.828 0.883
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
TsM_000683000 Homeodomain 243 288
TsM_000683000 Homeodomain 299 315

Links

Other Homeodomain family TFs
Other Taenia solium TFs

21 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PILCRDRAFT_88827 Piloderma croceum PILCRDRAFT_88827 N
M413DRAFT_251633 Hebeloma cylindrosporum M413DRAFT_251633 N
M422DRAFT_51716 Sphaerobolus stellatus M422DRAFT_51716 N
Moror_9126 Moniliophthora roreri Moror_9126 N
MPER_02700 Moniliophthora perniciosa MPER_02700 N
PAXINDRAFT_171258 Paxillus involutus PAXINDRAFT_171258 N
PAXRUDRAFT_13038 Paxillus rubicundulus PAXRUDRAFT_13038 N
PHACADRAFT_260812 Phanerochaete carnosa PHACADRAFT_260812 N
PILCRDRAFT_820945 Piloderma croceum PILCRDRAFT_820945 N
M378DRAFT_335299 Amanita muscaria M378DRAFT_335299 N
PISMIDRAFT_111299 Pisolithus microcarpus PISMIDRAFT_111299 N
PLEOSDRAFT_1059069 Pleurotus ostreatus PLEOSDRAFT_1059069 N
POSPLDRAFT_90448 Postia placenta POSPLDRAFT_90448 N
PUNSTDRAFT_122479 Punctularia strigosozonata PUNSTDRAFT_122479 N
SCHCODRAFT_66326 Schizophyllum commune SCHCODRAFT_66326 N
SCHCODRAFT_86018 Schizophyllum commune SCHCODRAFT_86018 N
SCLCIDRAFT_18361 Scleroderma citrinum SCLCIDRAFT_18361 N
SERLA73DRAFT_65990 Serpula lacrymans SERLA73DRAFT_65990 N
GLOTRDRAFT_18412 Gloeophyllum trabeum GLOTRDRAFT_18412 N
BOTBODRAFT_462541 Botryobasidium botryosum BOTBODRAFT_462541 N
CC1G_01569 Coprinopsis cinerea CC1G_01569 N
CERSUDRAFT_116480 Ceriporiopsis subvermispora CERSUDRAFT_116480 N
CY34DRAFT_557025 Suillus luteus CY34DRAFT_557025 N
DACRYDRAFT_54061 Dacryopinax sp DACRYDRAFT_54061 N
DICSQDRAFT_147115 Dichomitus squalens DICSQDRAFT_147115 N
FOMPIDRAFT_1130876 Fomitopsis pinicola FOMPIDRAFT_1130876 N
GALMADRAFT_224580 Galerina marginata GALMADRAFT_224580 N
AGABI2DRAFT_121841 Agaricus bisporus AGABI2DRAFT_121841 N
GYMLUDRAFT_145769 Gymnopus luxurians GYMLUDRAFT_145769 N
GYMLUDRAFT_59059 Gymnopus luxurians GYMLUDRAFT_59059 N
HETIRDRAFT_322707 Heterobasidion irregulare HETIRDRAFT_322707 N
HYDPIDRAFT_177790 Hydnomerulius pinastri HYDPIDRAFT_177790 N
JAAARDRAFT_36799 Jaapia argillacea JAAARDRAFT_36799 N
K443DRAFT_384813 Laccaria amethystina K443DRAFT_384813 N
LACBIDRAFT_293949 Laccaria bicolor LACBIDRAFT_293949 N