CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

OBART01G20060 *(Oryza barthii)* HSF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00447 (HSF_DNA-bind)	IPR000232	OBART01G20060	T241365_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
HSFA6B M06941_2.00	Arabidopsis thaliana	RGAASNTTCTAGA	TCTAGAANSTTCY	Dap-seq OMalley et al.(2016) HSFA6B_colamp_a	0.438	0.736
HSFA6B M06942_2.00	Arabidopsis thaliana	RGAABNTTCTRGAAN	NTTCYAGAANVTTCY	Dap-seq OMalley et al.(2016) HSFA6B_col	0.438	0.736
HSFB4 M06936_2.00	Arabidopsis thaliana	RGAASNTTCTAGAAN	NTTCTAGAANSTTCY	Dap-seq OMalley et al.(2016) HSFB4_col_a	0.434	0.655
HSFA4A M06947_2.00	Arabidopsis thaliana	NNNRGAABBTTCTAGAANN	NNTTCTAGAAVVTTCYNNN	Dap-seq OMalley et al.(2016) HSF21_col_a	0.415	0.644
HSFC1 M00868_2.00	Arabidopsis thaliana	NDTCBNNN	NNNVGAHN	PBM Franco-Zorrilla et al.(2014) HSFC1	0.398	0.678
HSFC1 M06943_2.00	Arabidopsis thaliana	GAASNTTCTAG	CTAGAANSTTC	Dap-seq OMalley et al.(2016) HSFC1_col_a	0.398	0.678
HSFC1 M06944_2.00	Arabidopsis thaliana	RGAASNTTCTAGAANVW	WBNTTCTAGAANSTTCY	Dap-seq OMalley et al.(2016) HSFC1_colamp_a	0.398	0.678
HSFA6A M06950_2.00	Arabidopsis thaliana	GAASNTTCTAGAANNW	WNNTTCTAGAANSTTC	Dap-seq OMalley et al.(2016) HSFA6A_col_a	0.397	0.632
HSFA6A M06951_2.00	Arabidopsis thaliana	GAASNTTCTAGAA	TTCTAGAANSTTC	Dap-seq OMalley et al.(2016) HSFA6A_colamp_a	0.397	0.632
HSFB3 M06937_2.00	Arabidopsis thaliana	RRAANMWTCTAGAAV	BTTCTAGAWKNTTYY	Dap-seq OMalley et al.(2016) HSFB3_col_a	0.392	0.621
HSFB3 M06938_2.00	Arabidopsis thaliana	AABSTTCTAGAAN	NTTCTAGAASVTT	Dap-seq OMalley et al.(2016) HSFB3_colamp_a	0.392	0.621
HSFB2B M06945_2.00	Arabidopsis thaliana	RGAANNTTCTAGAA	TTCTAGAANNTTCY	Dap-seq OMalley et al.(2016) HSF7_col_a	0.386	0.598
HSFB2B M06946_2.00	Arabidopsis thaliana	RGAANNTTCTAGAA	TTCTAGAANNTTCY	Dap-seq OMalley et al.(2016) HSF7_colamp_a	0.386	0.598
HSFA1E M06939_2.00	Arabidopsis thaliana	RGAANNTTCTAGA	TCTAGAANNTTCY	Dap-seq OMalley et al.(2016) HSFA1E_col_a	0.386	0.678
HSFA1E M06940_2.00	Arabidopsis thaliana	RGAASNTTCTAGAAN	NTTCTAGAANSTTCY	Dap-seq OMalley et al.(2016) HSFA1E_colamp_a	0.386	0.678
HSFB2A M00869_2.00	Arabidopsis thaliana	NNNNNTTCB	VGAANNNNN	PBM Franco-Zorrilla et al.(2014) HSFB2A	0.383	0.598
HSFB2A M06952_2.00	Arabidopsis thaliana	GAANNTTCYAGA	TCTRGAANNTTC	Dap-seq OMalley et al.(2016) HSF6_col_a	0.383	0.598
HSFA1B M06948_2.00	Arabidopsis thaliana	GAANNTTCTAGA	TCTAGAANNTTC	Dap-seq OMalley et al.(2016) HSF3_col_a	0.361	0.655
HSFA1B M06949_2.00	Arabidopsis thaliana	TTCYRG	CYRGAA	Dap-seq OMalley et al.(2016) HSF3_colamp_a	0.361	0.655
For this family, TFs with SR scores > 0.318* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
OBART01G20060.1	HSF	71	163	FVAKTYEMVADAGTDAVVSWGPGGSGASFVVWDPHALAAGVLPRFFKHANFSSFVRQLNTYGFRKVTPDRWEFANEAFLAGQKHLLKNIKRRR

Links
Other HSF family TFs
Other *Oryza barthii* TFs

1419 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
Met	Drosophila virilis	FBgn0262800	N
PPAI009130	Phlebotomus papatasi	PPAI009130	N
MDOA014837	Musca domestica	MDOA014837	N
AMIN010921	Anopheles minimus	AMIN010921	N
AMEC005987	Anopheles melas	AMEC005987	N
AFUN008135	Anopheles funestus	AFUN008135	N
AFAF019435	Anopheles farauti	AFAF019435	N
AEPI007105	Anopheles epiroticus	AEPI007105	N
ADIR008109	Anopheles dirus	ADIR008109	N
ACUA022741	Anopheles culicifacies	ACUA022741	N
ACOM024819	Anopheles coluzzii	ACOM024819	N
ACHR009875	Anopheles christyi	ACHR009875	N
AATE004568	Anopheles atroparvus	AATE004568	N
AARA007504	Anopheles arabiensis	AARA007504	N
AALB004295	Anopheles albimanus	AALB004295	N
LCUP002267	Lucilia cuprina	LCUP002267	N
AAEL001746	Aedes aegypti	AAEL001746	N
gce	Drosophila melanogaster	FBgn0261703	N
GE17175	Drosophila yakuba	FBgn0234654	N
GK16199	Drosophila willistoni	FBgn0218201	N
GK10105	Drosophila willistoni	FBgn0212120	N
GJ16946	Drosophila virilis	FBgn0204124	N
GD17204	Drosophila simulans	FBgn0188768	N
GI21773	Drosophila mojavensis	FBgn0144503	N
GI14831	Drosophila mojavensis	FBgn0137582	N
GH24193	Drosophila grimshawi	FBgn0131649	N
GH17616	Drosophila grimshawi	FBgn0125086	N
GF21231	Drosophila ananassae	FBgn0098233	N
GA19443	Drosophila pseudoobscura	FBgn0079439	N
Bhlh_PAS	Anopheles gambiae	AGAP006022	N
ADAC003960	Anopheles darlingi	ADAC003960	N

OBART01G20060 (Oryza barthii) HSF

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

1419 Related TFs

OBART01G20060 **(Oryza barthii)
HSF**