CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

OLONG_003348 *(Oryza longistaminata)* HSF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00447 (HSF_DNA-bind)	IPR000232	OLONG_003348	T241422_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
HSFC1 M00868_2.00	Arabidopsis thaliana	NDTCBNNN	NNNVGAHN	PBM Franco-Zorrilla et al.(2014) HSFC1	0.451	0.724
HSFC1 M06943_2.00	Arabidopsis thaliana	GAASNTTCTAG	CTAGAANSTTC	Dap-seq OMalley et al.(2016) HSFC1_col_a	0.451	0.724
HSFC1 M06944_2.00	Arabidopsis thaliana	RGAASNTTCTAGAANVW	WBNTTCTAGAANSTTCY	Dap-seq OMalley et al.(2016) HSFC1_colamp_a	0.451	0.724
HSFB4 M06936_2.00	Arabidopsis thaliana	RGAASNTTCTAGAAN	NTTCTAGAANSTTCY	Dap-seq OMalley et al.(2016) HSFB4_col_a	0.419	0.644
HSFA6B M06941_2.00	Arabidopsis thaliana	RGAASNTTCTAGA	TCTAGAANSTTCY	Dap-seq OMalley et al.(2016) HSFA6B_colamp_a	0.401	0.701
HSFA6B M06942_2.00	Arabidopsis thaliana	RGAABNTTCTRGAAN	NTTCYAGAANVTTCY	Dap-seq OMalley et al.(2016) HSFA6B_col	0.401	0.701
HSFA4A M06947_2.00	Arabidopsis thaliana	NNNRGAABBTTCTAGAANN	NNTTCTAGAAVVTTCYNNN	Dap-seq OMalley et al.(2016) HSF21_col_a	0.394	0.609
HSFB2B M06945_2.00	Arabidopsis thaliana	RGAANNTTCTAGAA	TTCTAGAANNTTCY	Dap-seq OMalley et al.(2016) HSF7_col_a	0.378	0.609
HSFB2B M06946_2.00	Arabidopsis thaliana	RGAANNTTCTAGAA	TTCTAGAANNTTCY	Dap-seq OMalley et al.(2016) HSF7_colamp_a	0.378	0.609
HSFA6A M06950_2.00	Arabidopsis thaliana	GAASNTTCTAGAANNW	WNNTTCTAGAANSTTC	Dap-seq OMalley et al.(2016) HSFA6A_col_a	0.359	0.586
HSFA6A M06951_2.00	Arabidopsis thaliana	GAASNTTCTAGAA	TTCTAGAANSTTC	Dap-seq OMalley et al.(2016) HSFA6A_colamp_a	0.359	0.586
HSFB3 M06937_2.00	Arabidopsis thaliana	RRAANMWTCTAGAAV	BTTCTAGAWKNTTYY	Dap-seq OMalley et al.(2016) HSFB3_col_a	0.359	0.563
HSFB3 M06938_2.00	Arabidopsis thaliana	AABSTTCTAGAAN	NTTCTAGAASVTT	Dap-seq OMalley et al.(2016) HSFB3_colamp_a	0.359	0.563
HSFA1E M06939_2.00	Arabidopsis thaliana	RGAANNTTCTAGA	TCTAGAANNTTCY	Dap-seq OMalley et al.(2016) HSFA1E_col_a	0.352	0.655
HSFA1E M06940_2.00	Arabidopsis thaliana	RGAASNTTCTAGAAN	NTTCTAGAANSTTCY	Dap-seq OMalley et al.(2016) HSFA1E_colamp_a	0.352	0.655
HSFB2A M00869_2.00	Arabidopsis thaliana	NNNNNTTCB	VGAANNNNN	PBM Franco-Zorrilla et al.(2014) HSFB2A	0.345	0.563
HSFB2A M06952_2.00	Arabidopsis thaliana	GAANNTTCYAGA	TCTRGAANNTTC	Dap-seq OMalley et al.(2016) HSF6_col_a	0.345	0.563
HSFA1B M06948_2.00	Arabidopsis thaliana	GAANNTTCTAGA	TCTAGAANNTTC	Dap-seq OMalley et al.(2016) HSF3_col_a	0.338	0.667
HSFA1B M06949_2.00	Arabidopsis thaliana	TTCYRG	CYRGAA	Dap-seq OMalley et al.(2016) HSF3_colamp_a	0.338	0.667
For this family, TFs with SR scores > 0.318* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
OLONG_003348-R1	HSF	27	117	FVAKTYQMVCDPRTDALVRWGWDNNSFVVVDPAAFSQLLLPCFFKHGNFSSFVRQLNTYGFRKVHPDRWEFAHESFLRGQTHLLPRIVRRK

Links
Other HSF family TFs
Other *Oryza longistaminata* TFs

1342 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
THAP3	Monodelphis domestica	ENSMODG00000005922	N
ENSP00000383703	Macaca fascicularis	ENSP00000383703	N
ENSBTAP00000014893-D1	Bos grunniens	ENSBTAP00000014893-D1	N
ENSSSCG00000003378	Sus scrofa	ENSSSCG00000003378	N
Thap3	Rattus norvegicus	ENSRNOG00000026840	N
THAP3	Pteropus vampyrus	ENSPVAG00000013024	N
THAP3	Pan troglodytes	ENSPTRG00000000093	N
ENSPPYG00000001935	Pongo abelii	ENSPPYG00000001935	N
ENSPANG00000000281	Papio anubis	ENSPANG00000000281	N
THAP3	Ochotona princeps	ENSOPRG00000001961	N
THAP3	Otolemur garnettii	ENSOGAG00000029491	N
THAP3	Oryctolagus cuniculus	ENSOCUG00000008846	N
ENSOARG00000011230	Ovis aries	ENSOARG00000011230	N
ENSNLEG00000008620	Nomascus leucogenys	ENSNLEG00000008620	N
Thap3	Mus musculus	ENSMUSG00000039759	N
THAP3	Bos taurus	ENSBTAG00000011214	N
THAP3	Macaca mulatta	ENSMMUG00000002047	N
THAP3	Myotis lucifugus	ENSMLUG00000029196	N
THAP3	Loxodonta africana	ENSLAFG00000015981	N
ENSLACG00000015746	Latimeria chalumnae	ENSLACG00000015746	N
ENSGGOG00000006842	Gorilla gorilla	ENSGGOG00000006842	N
THAP3	Homo sapiens	ENSG00000041988	N
THAP3	Felis catus	ENSFCAG00000000662	N
THAP3	Erinaceus europaeus	ENSEEUG00000003448	N
THAP3	Equus caballus	ENSECAG00000009778	N
ENSCSAG00000000749	Chlorocebus sabaeus	ENSCSAG00000000749	N
THAP3	Cavia porcellus	ENSCPOG00000021946	N
THAP3	Callithrix jacchus	ENSCJAG00000000237	N
THAP3	Canis familiaris	ENSCAFG00000019625	N

OLONG_003348 (Oryza longistaminata) HSF

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

1342 Related TFs

OLONG_003348 **(Oryza longistaminata)
HSF**