CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Phyra85854
(
Phytophthora ramorum
)
HSF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00447 (HSF_DNA-bind)
IPR000232
Phyra85854
T241767_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Phyra85854
HSF
9
101
FVRKLYRILDHESAAVIAWDADGASFSIHDSAALDAQILPRYFRGRLCAFRQQLVDHGFARCDCEENELREKYKHPEFQRGQPGRLSKIERKP
Links
Other
HSF
family TFs
Other
Phytophthora ramorum
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PYU1_G006823
Pythium ultimum
PYU1_G006823
I
0.378
maker-pir_contig_839-snap-gene-0.8
Pythium irregulare
maker-pir_contig_839-snap-gene-0.8
N
0.341
estExt_fgenesh1_kg.C_170712
Phytophthora capsici
estExt_fgenesh1_kg.C_170712
N
0.552
PYU1_G006824
Pythium ultimum
PYU1_G006824
N
0.484
PITG_17391
Phytophthora infestans
PITG_17391
N
0.348
Physo128590
Phytophthora sojae
Physo128590
N
0.579
Physo128589
Phytophthora sojae
Physo128589
N
0.348
Phyra85853
Phytophthora ramorum
Phyra85853
N
0.407
maker-pve_contig_301-fgenesh-gene-0.3
Pythium vexans
maker-pve_contig_301-fgenesh-gene-0.3
N
0.482
maker-pve_contig_301-fgenesh-gene-0.2
Pythium vexans
maker-pve_contig_301-fgenesh-gene-0.2
N
0.325
SPRG_14746
Saprolegnia parasitica
SPRG_14746
N
0.323
maker-pir_contig_839-snap-gene-0.7
Pythium irregulare
maker-pir_contig_839-snap-gene-0.7
N
0.498
maker-pag1_scaffold_73-snap-gene-0.36
Pythium aphanidermatum
maker-pag1_scaffold_73-snap-gene-0.36
N
0.421
maker-pag1_scaffold_223-snap-gene-0.15
Pythium aphanidermatum
maker-pag1_scaffold_223-snap-gene-0.15
N
0.364
fgenesh_scip_prom.46568.4988
Phytophthora kernoviae
fgenesh_scip_prom.46568.4988
N
0.391
fgenesh_scip_prom.28083.7384
Phytophthora lateralis
fgenesh_scip_prom.28083.7384
N
0.386
fgenesh-par_contig_48-abinit-gene-0.93
Pythium arrhenomanes
fgenesh-par_contig_48-abinit-gene-0.93
N
0.458
F443_04727
Phytophthora parasitica
F443_04727
N
0.542
F443_04726
Phytophthora parasitica
F443_04726
N
0.354
SPRG_14762
Saprolegnia parasitica
SPRG_14762
N
0.323