Afo_R014105 (Aptenodytes forsteri)
HSF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00447 (HSF_DNA-bind) IPR000232 Afo_R014105 T242540_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Hsf2
M09231_2.00 		Mus musculus
VGAABVTTCKVGAN
NTCBMGAABVTTCB		 Misc
Kulakovskiy et al.(2013)
HSF2_MOUSE.H11MO.0.A 		0.351 0.701
HSF2
M03324_2.00 		Homo sapiens
GAANVTTCTAGAA
TTCTAGAABNTTC		 SELEX
Jolma et al.(2013)
HSF2_1 		0.344 0.675
HSF2
M02744_2.00 		Homo sapiens
GAABGTTCTRGA
TCYAGAACVTTC		 SELEX
Jolma et al.(2010)
HSF2_dimertrimer 		0.344 0.675
HSF2
M05505_2.00 		Homo sapiens
VGAABVTTCBVGAWN
NWTCBVGAABVTTCB		 SELEX
Yin et al.(2017)
HSF2_eDBD_HT-SELEX 		0.344 0.675
HSF2
M05507_2.00 		Homo sapiens
VGAANNTTCBVGAAN
NTTCBVGAANNTTCB		 SELEX
Yin et al.(2017)
HSF2_FL_HT-SELEX 		0.344 0.675
HSF2
M09229_2.00 		Homo sapiens
VGAABVTTCKVGAN
NTCBMGAABVTTCB		 Misc
Kulakovskiy et al.(2013)
HSF2_HUMAN.H11MO.0.A 		0.344 0.675
HSF2
M10859_2.00 		Homo sapiens
VGAANNWTCB
VGAWNNTTCB		 Transfac
Matys et al.(2006)
V$HSF2_01 		0.344 0.675
HSF2
M10860_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HSF2_02 		0.344 0.675
HSF2
M10861_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HSF2_Q6 		0.344 0.675
HSF2
M05506_2.00 		Homo sapiens
RGAABVTTCYRGAWN
NWTCYRGAABVTTCY		 SELEX
Yin et al.(2017)
HSF2_eDBD_Methyl-HT-SELEX 		0.344 0.675
HSF2
M05508_2.00 		Homo sapiens
RGAABVTTCYRGAWN
NWTCYRGAABVTTCY		 SELEX
Yin et al.(2017)
HSF2_FL_Methyl-HT-SELEX 		0.344 0.675
hsf2
M02248_2.00 		Danio rerio
NNNWGTTCTATNN
NNATAGAACWNNN		 PBM
Weirauch et al.(2014)
pTH9010 		0.328 0.636
For this family, TFs with SR scores > 0.318 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Afo_R014105 HSF 1 80

Links

Other HSF family TFs
Other Aptenodytes forsteri TFs

91 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_037_00296 Aquilegia coerulea Aquca_037_00296 I
SELMODRAFT_163230 Selaginella moellendorffii SELMODRAFT_163230 I
SELMODRAFT_16705 Selaginella moellendorffii SELMODRAFT_16705 I
SELMODRAFT_270329 Selaginella moellendorffii SELMODRAFT_270329 I
SELMODRAFT_37142 Selaginella moellendorffii SELMODRAFT_37142 I
Si023295m.g Setaria italica Si023295m.g I
Si038805m.g Setaria italica Si038805m.g I
Solyc01g028930.2 Solanum lycopersicum Solyc01g028930.2 I
Traes_4BS_4F52653D8 Triticum aestivum Traes_4BS_4F52653D8 I
Traes_4DS_700213C0B Triticum aestivum Traes_4DS_700213C0B I
29950.m001154 Ricinus communis 29950.m001154 I
cassava22625.valid.m1 Manihot esculenta cassava22625.valid.m1 I
cassava35684.valid.m1 Manihot esculenta cassava35684.valid.m1 I
Cucsa.142180 Cucumis sativus Cucsa.142180 I
estExt_Genewise1.C_2460019 Physcomitrella patens estExt_Genewise1.C_2460019 I
mgf009543m Mimulus guttatus mgf009543m I
Sb08g022273 Sorghum bicolor Sb08g022273 I
Ciclev10022324m.g Citrus clementina Ciclev10022324m.g I
Eucgr.J01752 Eucalyptus grandis Eucgr.J01752 I
Eucgr.K01483 Eucalyptus grandis Eucgr.K01483 I
gene01591-v1.0-hybrid Fragaria vesca gene01591-v1.0-hybrid I
Gorai.004G244700 Gossypium raimondii Gorai.004G244700 I
Gorai.007G288000 Gossypium raimondii Gorai.007G288000 I
Gorai.013G202900 Gossypium raimondii Gorai.013G202900 I
Lus10002634.g Linum usitatissimum Lus10002634.g I
Lus10020260.g Linum usitatissimum Lus10020260.g I
Pavir.Ib04166 Panicum virgatum Pavir.Ib04166 I
SapurV1A.0680s0010 Salix purpurea SapurV1A.0680s0010 I
PK11932.1 Cannabis sativa PK11932.1 I
PK25605.1 Cannabis sativa PK25605.1 I
LjT45I18.100.nd Lotus japonicus LjT45I18.100.nd I
PDK_20s1715251g002 Phoenix dactylifera PDK_20s1715251g002 I
OBART12G16890 Oryza barthii OBART12G16890 I
BATDEDRAFT_90475 Batrachochytrium dendrobatidis BATDEDRAFT_90475 I
BGIOSGA037671 Oryza indica BGIOSGA037671 I
BRADI1G13220 Brachypodium distachyon BRADI1G13220 I
GLYMA03G04500 Glycine max GLYMA03G04500 I
GLYMA09G41330 Glycine max GLYMA09G41330 I
GLYMA16G25450 Glycine max GLYMA16G25450 I
GLYMA18G44460 Glycine max GLYMA18G44460 I
GLYMA19G28780 Glycine max GLYMA19G28780 I
GRMZM2G149238 Zea mays GRMZM2G149238 I
GRMZM2G161418 Zea mays GRMZM2G161418 I
LPERR12G14180 Leersia perrieri LPERR12G14180 I
MLOC_44969 Hordeum vulgare MLOC_44969 I
MTR_7g072580 Medicago truncatula MTR_7g072580 I
OB03G33300 Oryza brachyantha OB03G33300 I
OBART03G28150 Oryza barthii OBART03G28150 I
AMTR_s00064p00125250 Amborella trichopoda AMTR_s00064p00125250 I
OGLUM03G28780 Oryza glumaepatula OGLUM03G28780 I
OGLUM12G18540 Oryza glumaepatula OGLUM12G18540 I
OLONG_010453 Oryza longistaminata OLONG_010453 I
OMERI03G24790 Oryza meridionalis OMERI03G24790 I
OMERI11G15350 Oryza meridionalis OMERI11G15350 I
ONIVA03G29180 Oryza nivara ONIVA03G29180 I
OPUNC03G25660 Oryza punctata OPUNC03G25660 I
OPUNC12G15370 Oryza punctata OPUNC12G15370 I
ORGLA03G0260300 Oryza glaberrima ORGLA03G0260300 I
ORGLA12G0202200 Oryza glaberrima ORGLA12G0202200 I
TBP2 Oryza sativa OS03G0657000 I
OS12G0580300 Oryza sativa OS12G0580300 I
POPTR_0013s05580 Populus trichocarpa POPTR_0013s05580 I
PRUPE_ppa011711mg Prunus persica PRUPE_ppa011711mg I
Sb01g012880 Sorghum bicolor Sb01g012880 I