gene29004-v1.0-hybrid (Fragaria vesca)
HSF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00447 (HSF_DNA-bind) IPR000232 gene29004-v1.0-hybrid T243163_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HSFA6B
M06941_2.00 		Arabidopsis thaliana
RGAASNTTCTAGA
TCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
HSFA6B_colamp_a 		0.509 0.805
HSFA6B
M06942_2.00 		Arabidopsis thaliana
RGAABNTTCTRGAAN
NTTCYAGAANVTTCY		 Dap-seq
OMalley et al.(2016)
HSFA6B_col 		0.509 0.805
HSFA6A
M06950_2.00 		Arabidopsis thaliana
GAASNTTCTAGAANNW
WNNTTCTAGAANSTTC		 Dap-seq
OMalley et al.(2016)
HSFA6A_col_a 		0.475 0.736
HSFA6A
M06951_2.00 		Arabidopsis thaliana
GAASNTTCTAGAA
TTCTAGAANSTTC		 Dap-seq
OMalley et al.(2016)
HSFA6A_colamp_a 		0.475 0.736
HSFA4A
M06947_2.00 		Arabidopsis thaliana
NNNRGAABBTTCTAGAANN
NNTTCTAGAAVVTTCYNNN		 Dap-seq
OMalley et al.(2016)
HSF21_col_a 		0.445 0.667
HSFA1B
M06948_2.00 		Arabidopsis thaliana
GAANNTTCTAGA
TCTAGAANNTTC		 Dap-seq
OMalley et al.(2016)
HSF3_col_a 		0.440 0.759
HSFA1B
M06949_2.00 		Arabidopsis thaliana
TTCYRG
CYRGAA		 Dap-seq
OMalley et al.(2016)
HSF3_colamp_a 		0.440 0.759
HSFA1E
M06939_2.00 		Arabidopsis thaliana
RGAANNTTCTAGA
TCTAGAANNTTCY		 Dap-seq
OMalley et al.(2016)
HSFA1E_col_a 		0.426 0.747
HSFA1E
M06940_2.00 		Arabidopsis thaliana
RGAASNTTCTAGAAN
NTTCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
HSFA1E_colamp_a 		0.426 0.747
HSFB4
M06936_2.00 		Arabidopsis thaliana
RGAASNTTCTAGAAN
NTTCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
HSFB4_col_a 		0.424 0.678
HSFB2A
M00869_2.00 		Arabidopsis thaliana
NNNNNTTCB
VGAANNNNN		 PBM
Franco-Zorrilla et al.(2014)
HSFB2A 		0.397 0.621
HSFB2A
M06952_2.00 		Arabidopsis thaliana
GAANNTTCYAGA
TCTRGAANNTTC		 Dap-seq
OMalley et al.(2016)
HSF6_col_a 		0.397 0.621
HSFB2B
M06945_2.00 		Arabidopsis thaliana
RGAANNTTCTAGAA
TTCTAGAANNTTCY		 Dap-seq
OMalley et al.(2016)
HSF7_col_a 		0.395 0.621
HSFB2B
M06946_2.00 		Arabidopsis thaliana
RGAANNTTCTAGAA
TTCTAGAANNTTCY		 Dap-seq
OMalley et al.(2016)
HSF7_colamp_a 		0.395 0.621
HSFC1
M00868_2.00 		Arabidopsis thaliana
NDTCBNNN
NNNVGAHN		 PBM
Franco-Zorrilla et al.(2014)
HSFC1 		0.392 0.690
HSFC1
M06943_2.00 		Arabidopsis thaliana
GAASNTTCTAG
CTAGAANSTTC		 Dap-seq
OMalley et al.(2016)
HSFC1_col_a 		0.392 0.690
HSFC1
M06944_2.00 		Arabidopsis thaliana
RGAASNTTCTAGAANVW
WBNTTCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
HSFC1_colamp_a 		0.392 0.690
HSFB3
M06937_2.00 		Arabidopsis thaliana
RRAANMWTCTAGAAV
BTTCTAGAWKNTTYY		 Dap-seq
OMalley et al.(2016)
HSFB3_col_a 		0.370 0.609
HSFB3
M06938_2.00 		Arabidopsis thaliana
AABSTTCTAGAAN
NTTCTAGAASVTT		 Dap-seq
OMalley et al.(2016)
HSFB3_colamp_a 		0.370 0.609
For this family, TFs with SR scores > 0.318 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mrna29004.1-v1.0-hybrid HSF 12 102

Links

Other HSF family TFs
Other Fragaria vesca TFs

1450 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
NCU07952 Neurospora crassa NCU07952 D
CIMG_04025 Coccidioides immitis CIMG_04025 I
MCYG_01140 Microsporum canis MCYG_01140 I
SNOG_05002 Stagonospora nodorum SNOG_05002 I
VDBG_06048 Verticillium albo atrum VDBG_06048 I
A1O3_09941 Capronia epimyces A1O3_09941 I
A1O5_05402 Cladophialophora psammophila A1O5_05402 I
A1O7_06547 Cladophialophora yegresii A1O7_06547 I
A1O9_10759 Exophiala aquamarina A1O9_10759 I
ACRE_066120 Acremonium chrysogenum ACRE_066120 I
AOL_s00110g91 Arthrobotrys oligospora AOL_s00110g91 I
ARB_00172 Arthroderma benhamiae ARB_00172 I
AUEXF2481DRAFT_24650 Aureobasidium subglaciale AUEXF2481DRAFT_24650 I
BAUCODRAFT_130739 Baudoinia compniacensis BAUCODRAFT_130739 I
BBA_06961 Beauveria bassiana BBA_06961 I
Bcin01g08230 Botrytis cinerea Bcin01g08230 I
BDDG_08511 Blastomyces dermatitidis BDDG_08511 I
BGHDH14_bgh02089 Blumeria graminis BGHDH14_bgh02089 I
ACLA_027670 Aspergillus clavatus CADACLAG00001684 I
CADAFLAG00009850 Aspergillus flavus CADAFLAG00009850 I
AFUA_1G06900 Aspergillus fumigatus CADAFUAG00008684 I
CADANGAG00014230 Aspergillus niger CADANGAG00014230 I
ANIA_05726 Aspergillus nidulans CADANIAG00003336 I
CADAORAG00000448 Aspergillus oryzae CADAORAG00000448 I
ATEG_02928 Aspergillus terreus CADATEAG00010284 I
NFIA_017790 Neosartorya fischeri CADNFIAG00001566 I
CCM_06653 Cordyceps militaris CCM_06653 I
CFIO01_13401 Colletotrichum fioriniae CFIO01_13401 I
CGGC5_2430 Colletotrichum gloeosporioides CGGC5_2430 I
CHGG_05033 Chaetomium globosum CHGG_05033 I
CMQ_7368 Grosmannia clavigera CMQ_7368 I
Cob_01618 Colletotrichum orbiculare Cob_01618 I
COCC4DRAFT_144568 Bipolaris maydis COCC4DRAFT_144568 I
COCCADRAFT_108895 Bipolaris zeicola COCCADRAFT_108895 I
COCMIDRAFT_82997 Bipolaris oryzae COCMIDRAFT_82997 I
COCSADRAFT_249666 Bipolaris sorokiniana COCSADRAFT_249666 I
COCVIDRAFT_98457 Bipolaris victoriae COCVIDRAFT_98457 I
CPC735_003570 Coccidioides posadasii CPC735_003570 I
CPUR_01775 Claviceps purpurea CPUR_01775 I
CSUB01_01407 Colletotrichum sublineola CSUB01_01407 I
CTHT_0031440 Chaetomium thermophilum CTHT_0031440 I
DOTSEDRAFT_152208 Dothistroma septosporum DOTSEDRAFT_152208 I
DRE_04887 Drechslerella stenobrocha DRE_04887 I
EPUS_01490 Endocarpon pusillum EPUS_01490 I
EURHEDRAFT_446038 Aspergillus ruber EURHEDRAFT_446038 I
F503_02827 Ophiostoma piceae uamh F503_02827 I
FFUJ_01538 Fusarium fujikuroi FFUJ_01538 I
FGRRES_01341 Fusarium graminearum FGRRES_01341 I
FOXG_00040 Fusarium oxysporum FOXG_00040 I
FPSE_03379 Fusarium pseudograminearum FPSE_03379 I
FVEG_01476 Fusarium verticillioides FVEG_01476 I
G647_05990 Cladophialophora carrionii G647_05990 I
GGTG_09945 Gaeumannomyces graminis GGTG_09945 I
GLRG_03936 Colletotrichum graminicola GLRG_03936 I
GMDG_07025 Pseudogymnoascus destructans GMDG_07025 I
GSTUM_00003205001 Tuber melanosporum GSTUM_00003205001 I
H072_3701 Dactylellina haptotyla H072_3701 I
H101_05158 Trichophyton interdigitale H101_05158 I
H102_01127 Trichophyton rubrum H102_01127 I
H105_01140 Trichophyton soudanense H105_01140 I
HCBG_02406 Histoplasma capsulatum HCBG_02406 I
HMPREF1120_03777 Exophiala dermatitidis HMPREF1120_03777 I
HMPREF1541_01496 Cyphellophora europaea HMPREF1541_01496 I
HMPREF1624_02702 Sporothrix schenckii HMPREF1624_02702 I
LEMA_P046340.1 Leptosphaeria maculans LEMA_P046340.1 I
M437DRAFT_48815 Aureobasidium melanogenum M437DRAFT_48815 I
M438DRAFT_134375 Aureobasidium pullulans M438DRAFT_134375 I
MAC_04600 Metarhizium acridum MAC_04600 I
MAJ_04587 Metarhizium majus MAJ_04587 I
MAM_03690 Metarhizium album MAM_03690 I
MANI_013553 Metarhizium anisopliae MANI_013553 I
MAPG_02863 Magnaporthe poae MAPG_02863 I
MBM_06247 Marssonina brunnea MBM_06247 I
MBR_06001 Metarhizium brunneum MBR_06001 I
MCYG_01140 Arthroderma otae MCYG_01140 I
MGG_05133 Magnaporthe oryzae MGG_05133 I
MGU_06476 Metarhizium guizhouense MGU_06476 I
MGYG_01691 Microsporum gypseum MGYG_01691 I
MPH_00854 Macrophomina phaseolina MPH_00854 I
MYCTH_59287 Myceliophthora thermophila MYCTH_59287 I
NechaG65383 Fusarium solani NechaG65383 I
NEUTE1DRAFT_128338 Neurospora tetrasperma NEUTE1DRAFT_128338 I
OCS_06574 Ophiocordyceps sinensis OCS_06574 I
OIDMADRAFT_26712 Oidiodendron maius OIDMADRAFT_26712 I
PAAG_07831 Paracoccidioides sp lutzii PAAG_07831 I
PCH_Pc13g03120 Penicillium rubens PCH_Pc13g03120 I
PDE_02584 Penicillium oxalicum PDE_02584 I
PDIP_68900 Penicillium digitatum PDIP_68900 I
PEX1_101950 Penicillium expansum PEX1_101950 I
PFICI_00980 Pestalotiopsis fici PFICI_00980 I
PITC_089390 Penicillium italicum PITC_089390 I
PMAA_026570 Talaromyces marneffei PMAA_026570 I
PODANS_3_1720 Podospora anserina PODANS_3_1720 I
PTRG_04116 Pyrenophora triticirepentis PTRG_04116 I
PTT_19703 Pyrenophora teres PTT_19703 I
PV04_06949 Capronia semiimmersa PV04_06949 I
PV05_08266 Exophiala xenobiotica PV05_08266 I
PV06_01972 Exophiala oligosperma PV06_01972 I
PV07_03056 Cladophialophora immunda PV07_03056 I
PV08_02892 Exophiala spinifera PV08_02892 I
PV09_03810 Verruconis gallopava PV09_03810 I
PV10_08344 Exophiala mesophila PV10_08344 I
PV11_06352 Exophiala sideris PV11_06352 I
PVAR5_1858 Byssochlamys spectabilis PVAR5_1858 I
S40285_06160 Stachybotrys chlorohalonata S40285_06160 I
S40288_04088 Stachybotrys chartarum S40288_04088 I
SAPIO_CDS3076 Scedosporium apiospermum SAPIO_CDS3076 I
SBOR_1289 Sclerotinia borealis SBOR_1289 I
SEPMUDRAFT_152049 Sphaerulina musiva SEPMUDRAFT_152049 I
SETTUDRAFT_132094 Setosphaeria turcica SETTUDRAFT_132094 I
SMAC_08565 Sordaria macrospora SMAC_08565 I
SNOG_05002 Phaeosphaeria nodorum SNOG_05002 I
SPBR_02428 Sporothrix brasiliensis SPBR_02428 I
SS1G_04676 Sclerotinia sclerotiorum SS1G_04676 I
TEQG_02078 Trichophyton equinum TEQG_02078 I
TESG_07609 Trichophyton tonsurans TESG_07609 I
THITE_2116088 Thielavia terrestris THITE_2116088 I
TRIATDRAFT_173231 Trichoderma atroviride TRIATDRAFT_173231 I
TRIREDRAFT_36391 Trichoderma reesei TRIREDRAFT_36391 I
TRIVIDRAFT_232155 Trichoderma virens TRIVIDRAFT_232155 I
TRV_07311 Trichophyton verrucosum TRV_07311 I
TSTA_072300 Talaromyces stipitatus TSTA_072300 I
U727_0043368031 Penicillium solitum U727_0043368031 I
UCREL1_10204 Eutypa lata UCREL1_10204 I
UCRNP2_5327 Neofusicoccum parvum UCRNP2_5327 I
UREG_01940 Uncinocarpus reesii UREG_01940 I
UV8b_2987 Ustilaginoidea virens UV8b_2987 I
V499_02401 Pseudogymnoascus pannorum V499_02401 I
VDAG_03208 Verticillium dahliae VDAG_03208 I
VDBG_06048 Verticillium alfalfae VDBG_06048 I
VHEMI08976 Torrubiella hemipterigena VHEMI08976 I
W97_08085 Coniosporium apollinis W97_08085 I
W97_09244 Coniosporium apollinis W97_09244 I
X797_005757 Metarhizium robertsii X797_005757 I
Z517_05592 Fonsecaea pedrosoi Z517_05592 I
Z518_05937 Rhinocladiella mackenziei Z518_05937 I
Z519_08276 Cladophialophora bantiana Z519_08276 I
AAE_estExt_fgenesh1_pg.C_chr_120283 Mycosphaerella graminicola AAE_estExt_fgenesh1_pg.C_chr_120283 I
estExt_Genewise1Plus.C_130195 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_130195 I
estExt_Genewise1Plus.C_31872 Neurospora discreta estExt_Genewise1Plus.C_31872 I
estExt_Genewise1Plus.C_sca_1_chr1_3_00050 Nectria haematococca estExt_Genewise1Plus.C_sca_1_chr1_3_00050 I
AB03945.1 Alternaria brassicicola AB03945.1 I
estExt_fgenesh1_pg.C_30488 Cryphonectria parasitica estExt_fgenesh1_pg.C_30488 I
fgenesh1_pm.00129_#_72 Aspergillus carbonarius fgenesh1_pm.00129_#_72 I
Pc13g03120 Penicillium chrysogenum Pc13g03120 I
PMAA_026570 Penicillium marneffei PMAA_026570 I
A1O9_08519 Exophiala aquamarina A1O9_08519 N
EV44_g2286 Erysiphe necator EV44_g2286 N
Mycgr3G50313 Zymoseptoria tritici Mycgr3G50313 N