IRF2 (Loxodonta africana)
IRF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00605 (IRF) IPR001346 ENSLAFG00000000088 T244138_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
IRF2
M05545_2.00 		Homo sapiens
NGAAAVYGAAAS
STTTCRBTTTCN		 SELEX
Yin et al.(2017)
IRF2_FL_HT-SELEX 		0.990 0.990
IRF2
M02691_2.00 		Homo sapiens
SGAAAGYGAAASYNWWHH
DDWWNRSTTTCRCTTTCS		 SELEX
Mathelier et al.(2014)
MA0051.1 		0.876 0.876
IRF2
M09237_2.00 		Homo sapiens
NRAANNGAAASYGAAASYRV
BYRSTTTCRSTTTCNNTTYN		 Misc
Kulakovskiy et al.(2013)
IRF2_HUMAN.H11MO.0.A 		0.990 0.990
IRF2
M09596_2.00 		Homo sapiens
NRAAVNRRAASB
VSTTYYNBTTYN		 Misc
Heinz et al.(2010)
Erythroblas-IRF2_GSE36985 		0.990 0.990
IRF2
M10892_2.00 		Homo sapiens
GAAAAGYGAAASY
RSTTTCRCTTTTC		 Transfac
Matys et al.(2006)
V$IRF2_01 		0.990 0.990
IRF2
M10893_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF2_Q6 		0.990 0.990
IRF2
M05546_2.00 		Homo sapiens
NGAAASYGAAAS
STTTCRSTTTCN		 SELEX
Yin et al.(2017)
IRF2_FL_Methyl-HT-SELEX 		0.990 0.990
Irf2
M00805_2.00 		Mus musculus
NDWNHGAAAV
BTTTCDNWHN		 PBM
Weirauch et al.(2013)
pTH2835 		0.971 0.971
Irf2
M09245_2.00 		Mus musculus
NRAANNGAAASYGAAASYRV
BYRSTTTCRSTTTCNNTTYN		 Misc
Kulakovskiy et al.(2013)
IRF2_MOUSE.H11MO.0.B 		0.856 0.856
IRF1
M08142_2.00 		Homo sapiens
RWANNGAAASYGAAASYRNNN
NNNYRSTTTCRSTTTCNNTWY		 ChIP-seq
Mathelier et al.(2014)
MA0050.2 		0.771 0.771
IRF1
M09233_2.00 		Homo sapiens
NRAANNGAAASWGAAASHRN
NYDSTTTCWSTTTCNNTTYN		 Misc
Kulakovskiy et al.(2013)
IRF1_HUMAN.H11MO.0.A 		0.771 0.771
Irf1
M09242_2.00 		Mus musculus
VRAANNGAAASYGAAASYVN
NBRSTTTCRSTTTCNNTTYB		 Misc
Kulakovskiy et al.(2013)
IRF1_MOUSE.H11MO.0.A 		0.771 0.771
IRF1
M09594_2.00 		Homo sapiens
GAAASTGAAASY
RSTTTCASTTTC		 Misc
Heinz et al.(2010)
PBMC-IRF1_GSE43036 		0.771 0.771
IRF1
M10879_2.00 		Homo sapiens
SAAAASYGAAASY
RSTTTCRSTTTTS		 Transfac
Matys et al.(2006)
V$IRF1_01 		0.771 0.771
IRF1
M10880_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF1_03 		0.771 0.771
IRF1
M10881_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF1_Q5 		0.771 0.771
IRF1
M10882_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF1_Q6 		0.771 0.771
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLAFP00000000075 IRF 7 112
ENSLAFP00000021374 IRF 3 100

Links

Other IRF family TFs
Other Loxodonta africana TFs

139 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
M407DRAFT_175924 Tulasnella calospora M407DRAFT_175924 N
fgenesh2_pg.C_scaffold_14000115 Heterobasidion annosum fgenesh2_pg.C_scaffold_14000115 N
fgenesh1_pg.C_scaffold_4000408 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_4000408 N
SERLA73DRAFT_159500 Serpula lacrymans SERLA73DRAFT_159500 N
SCLCIDRAFT_1213805 Scleroderma citrinum SCLCIDRAFT_1213805 N
SCHCODRAFT_236086 Schizophyllum commune SCHCODRAFT_236086 N
PLEOSDRAFT_1112913 Pleurotus ostreatus PLEOSDRAFT_1112913 N
PISMIDRAFT_102688 Pisolithus microcarpus PISMIDRAFT_102688 N
PHLGIDRAFT_365607 Phlebiopsis gigantea PHLGIDRAFT_365607 N
PHACADRAFT_260024 Phanerochaete carnosa PHACADRAFT_260024 N
PAXRUDRAFT_827663 Paxillus rubicundulus PAXRUDRAFT_827663 N
PAXINDRAFT_99404 Paxillus involutus PAXINDRAFT_99404 N
Moror_17790 Moniliophthora roreri Moror_17790 N
M413DRAFT_73437 Hebeloma cylindrosporum M413DRAFT_73437 N
AGABI2DRAFT_143213 Agaricus bisporus AGABI2DRAFT_143213 N
M404DRAFT_992132 Pisolithus tinctorius M404DRAFT_992132 N
M378DRAFT_70504 Amanita muscaria M378DRAFT_70504 N
LACBIDRAFT_296378 Laccaria bicolor LACBIDRAFT_296378 N
K443DRAFT_671746 Laccaria amethystina K443DRAFT_671746 N
JAAARDRAFT_196106 Jaapia argillacea JAAARDRAFT_196106 N
HETIRDRAFT_431082 Heterobasidion irregulare HETIRDRAFT_431082 N
GLOTRDRAFT_138787 Gloeophyllum trabeum GLOTRDRAFT_138787 N
GALMADRAFT_46548 Galerina marginata GALMADRAFT_46548 N
DICSQDRAFT_163481 Dichomitus squalens DICSQDRAFT_163481 N
CERSUDRAFT_118233 Ceriporiopsis subvermispora CERSUDRAFT_118233 N
BOTBODRAFT_62341 Botryobasidium botryosum BOTBODRAFT_62341 N
BN946_scf184985.g64 Trametes cinnabarina BN946_scf184985.g64 N