CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSOARG00000011513
(
Ovis aries
)
IRF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00605 (IRF)
IPR001346
ENSOARG00000011513
T244244_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Irf8
M09246_2.00
Mus musculus
NDDDRRGGAASTGAAASYNN
NNRSTTTCASTTCCYYHHHN
Misc
Kulakovskiy et al.(2013)
IRF8_MOUSE.H11MO.0.A
0.990
0.990
IRF8
M03335_2.00
Homo sapiens
HCGAAACYGAAACY
RGTTTCRGTTTCGD
SELEX
Jolma et al.(2013)
IRF8_1
0.971
0.971
IRF8
M03336_2.00
Homo sapiens
HCGAAACCGAAACT
AGTTTCGGTTTCGD
SELEX
Jolma et al.(2013)
IRF8_2
0.971
0.971
IRF8
M05541_2.00
Homo sapiens
NYGAAASYGAAASHN
NDSTTTCRSTTTCRN
SELEX
Yin et al.(2017)
IRF8_eDBD_HT-SELEX
0.971
0.971
IRF8
M05543_2.00
Homo sapiens
NCGAAACYGAAACYN
NRGTTTCRGTTTCGN
SELEX
Yin et al.(2017)
IRF8_FL_HT-SELEX
0.971
0.971
IRF8
M09236_2.00
Homo sapiens
NDDDRRGGAASTGAAASYNN
NNRSTTTCASTTCCYYHHHN
Misc
Kulakovskiy et al.(2013)
IRF8_HUMAN.H11MO.0.B
0.971
0.971
IRF8
M10890_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ICSBP_Q6
0.971
0.971
IRF8
M10891_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IRF8_Q6
0.971
0.971
IRF8
M05542_2.00
Homo sapiens
NYGAAASYGAAASYN
NRSTTTCRSTTTCRN
SELEX
Yin et al.(2017)
IRF8_eDBD_Methyl-HT-SELEX
0.971
0.971
IRF8
M05544_2.00
Homo sapiens
NYGAAASYGAAACYD
HRGTTTCRSTTTCRN
SELEX
Yin et al.(2017)
IRF8_FL_Methyl-HT-SELEX
0.971
0.971
Irf4
M00175_2.00
Mus musculus
NNNYGAWASN
NSTWTCRNNN
PBM
Badis et al.(2009)
Irf4_3476
0.798
0.798
IRF4
M03334_2.00
Homo sapiens
HCGAAACCGAAACYW
WRGTTTCGGTTTCGD
SELEX
Jolma et al.(2013)
IRF4_1
0.798
0.798
IRF4
M05539_2.00
Homo sapiens
NYGAAACYGAAACYN
NRGTTTCRGTTTCRN
SELEX
Yin et al.(2017)
IRF4_FL_HT-SELEX
0.798
0.798
IRF4
M07978_2.00
Homo sapiens
DNDVNNGWWVTGAVWVWN
NWBWBTCABWWCNNBHNH
ChIP-seq
Gerstein et al.(2012)
GM12878_IRF4_HudsonAlpha
0.798
0.798
IRF4
M09235_2.00
Homo sapiens
NDWDRRGGAASTGARAVH
DBTYTCASTTCCYYHWHN
Misc
Kulakovskiy et al.(2013)
IRF4_HUMAN.H11MO.0.A
0.798
0.798
Irf4
M09243_2.00
Mus musculus
NDAWVVRGAASTGARAVH
DBTYTCASTTCYBBWTHN
Misc
Kulakovskiy et al.(2013)
IRF4_MOUSE.H11MO.0.A
0.798
0.798
IRF4
M09595_2.00
Homo sapiens
HNYGAAASYD
HRSTTTCRND
Misc
Heinz et al.(2010)
GM12878-IRF4_GSE32465
0.798
0.798
IRF4
M10885_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IRF4_07
0.798
0.798
IRF4
M10886_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IRF4_08
0.798
0.798
IRF4
M10887_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IRF4_Q5_01
0.798
0.798
IRF4
M10888_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IRF4_Q5
0.798
0.798
IRF4
M10889_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IRF4_Q6
0.798
0.798
IRF4
M05540_2.00
Homo sapiens
NYGAAASYGAWASHN
NDSTWTCRSTTTCRN
SELEX
Yin et al.(2017)
IRF4_FL_Methyl-HT-SELEX
0.798
0.798
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOARP00000012337
IRF
9
113
RLRQWLIEQIDSTMYPGLIWENDEKTMFRIPWKHAGKQDYNQEVDASIFKAWAVFKGKFKEGDKAEPATWKTRLRCALNKSPDFEEVTDRSQLDISEPYKVYRIV
Links
Other
IRF
family TFs
Other
Ovis aries
TFs
165 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GGTG_02165
Gaeumannomyces graminis
GGTG_02165
N
0.000
fgenesh1_pm.sca_11_chr8_3_0000161
Nectria haematococca
fgenesh1_pm.sca_11_chr8_3_0000161
N
0.000
X797_002271
Metarhizium robertsii
X797_002271
N
0.000
VDBG_02844
Verticillium alfalfae
VDBG_02844
N
0.000
VDAG_03761
Verticillium dahliae
VDAG_03761
N
0.000
UV8b_1420
Ustilaginoidea virens
UV8b_1420
N
0.000
S40288_00719
Stachybotrys chartarum
S40288_00719
N
0.000
S40285_04994
Stachybotrys chlorohalonata
S40285_04994
N
0.000
OCS_01728
Ophiocordyceps sinensis
OCS_01728
N
0.000
NechaG95819
Fusarium solani
NechaG95819
N
0.000
MGU_02426
Metarhizium guizhouense
MGU_02426
N
0.000
MANI_115749
Metarhizium anisopliae
MANI_115749
N
0.000
MAM_07880
Metarhizium album
MAM_07880
N
0.000
MAJ_04177
Metarhizium majus
MAJ_04177
N
0.000
GLRG_08213
Colletotrichum graminicola
GLRG_08213
N
0.000
VDBG_02844
Verticillium albo atrum
VDBG_02844
N
0.000
FVEG_11185
Fusarium verticillioides
FVEG_11185
N
0.000
FPSE_09905
Fusarium pseudograminearum
FPSE_09905
N
0.000
FOXG_13751
Fusarium oxysporum
FOXG_13751
N
0.000
FGRRES_04459
Fusarium graminearum
FGRRES_04459
N
0.000
FFUJ_09949
Fusarium fujikuroi
FFUJ_09949
N
0.000
CSUB01_08191
Colletotrichum sublineola
CSUB01_08191
N
0.000
CPUR_04268
Claviceps purpurea
CPUR_04268
N
0.000
Cob_06895
Colletotrichum orbiculare
Cob_06895
N
0.000
CH063_12002
Colletotrichum higginsianum
CH063_12002
N
0.000
CGGC5_7905
Colletotrichum gloeosporioides
CGGC5_7905
N
0.000
CFIO01_02535
Colletotrichum fioriniae
CFIO01_02535
N
0.000
CCM_08564
Cordyceps militaris
CCM_08564
N
0.000
BBA_09380
Beauveria bassiana
BBA_09380
N
0.000