CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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irf1a
(
Tetraodon nigroviridis
)
IRF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00605 (IRF)
IPR001346
ENSTNIG00000004659
T244418_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTNIP00000007312
IRF
8
113
RLRPWLEEQIQSGRYPGVSWLDQSAQIFQIPWKHAARHGWSIDQDATLFRSWAMHTGRYRPGKDKPDPKTWKANFRCALNSLPDVCELQEHSRKRGNNAFRVYKML
Links
Other
IRF
family TFs
Other
Tetraodon nigroviridis
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
irf1a
Danio rerio
ENSDARG00000043492
I
0.829
IRF2
Erinaceus europaeus
ENSEEUG00000004690
I
0.707
ENSLOCG00000009136
Lepisosteus oculatus
ENSLOCG00000009136
I
0.800
ENSGACG00000016299
Gasterosteus aculeatus
ENSGACG00000016299
N
0.886
ENSGMOG00000005780
Gadus morhua
ENSGMOG00000005780
N
0.876
ENSONIG00000017180
Oreochromis niloticus
ENSONIG00000017180
N
0.905
ENSORLG00000011716
Oryzias latipes
ENSORLG00000011716
N
0.905
ENSPFOG00000015008
Poecilia formosa
ENSPFOG00000015008
N
0.905
ENSTRUG00000000250
Takifugu rubripes
ENSTRUG00000000250
N
0.962
ENSXMAG00000017512
Xiphophorus maculatus
ENSXMAG00000017512
N
0.904