Ogr18974 (Ophisaurus gracilis)
IRF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00605 (IRF) IPR001346 Ogr18974 T244572_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
IRF1
M08142_2.00 		Homo sapiens
RWANNGAAASYGAAASYRNNN
NNNYRSTTTCRSTTTCNNTWY		 ChIP-seq
Mathelier et al.(2014)
MA0050.2 		0.808 0.808
IRF1
M09233_2.00 		Homo sapiens
NRAANNGAAASWGAAASHRN
NYDSTTTCWSTTTCNNTTYN		 Misc
Kulakovskiy et al.(2013)
IRF1_HUMAN.H11MO.0.A 		0.808 0.808
Irf1
M09242_2.00 		Mus musculus
VRAANNGAAASYGAAASYVN
NBRSTTTCRSTTTCNNTTYB		 Misc
Kulakovskiy et al.(2013)
IRF1_MOUSE.H11MO.0.A 		0.808 0.808
IRF1
M09594_2.00 		Homo sapiens
GAAASTGAAASY
RSTTTCASTTTC		 Misc
Heinz et al.(2010)
PBMC-IRF1_GSE43036 		0.808 0.808
IRF1
M10879_2.00 		Homo sapiens
SAAAASYGAAASY
RSTTTCRSTTTTS		 Transfac
Matys et al.(2006)
V$IRF1_01 		0.808 0.808
IRF1
M10880_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF1_03 		0.808 0.808
IRF1
M10881_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF1_Q5 		0.808 0.808
IRF1
M10882_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF1_Q6 		0.808 0.808
IRF2
M05545_2.00 		Homo sapiens
NGAAAVYGAAAS
STTTCRBTTTCN		 SELEX
Yin et al.(2017)
IRF2_FL_HT-SELEX 		0.731 0.731
IRF2
M02691_2.00 		Homo sapiens
SGAAAGYGAAASYNWWHH
DDWWNRSTTTCRCTTTCS		 SELEX
Mathelier et al.(2014)
MA0051.1 		0.731 0.731
IRF2
M09237_2.00 		Homo sapiens
NRAANNGAAASYGAAASYRV
BYRSTTTCRSTTTCNNTTYN		 Misc
Kulakovskiy et al.(2013)
IRF2_HUMAN.H11MO.0.A 		0.731 0.731
IRF2
M09596_2.00 		Homo sapiens
NRAAVNRRAASB
VSTTYYNBTTYN		 Misc
Heinz et al.(2010)
Erythroblas-IRF2_GSE36985 		0.731 0.731
IRF2
M10892_2.00 		Homo sapiens
GAAAAGYGAAASY
RSTTTCRCTTTTC		 Transfac
Matys et al.(2006)
V$IRF2_01 		0.731 0.731
IRF2
M10893_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF2_Q6 		0.731 0.731
IRF2
M05546_2.00 		Homo sapiens
NGAAASYGAAAS
STTTCRSTTTCN		 SELEX
Yin et al.(2017)
IRF2_FL_Methyl-HT-SELEX 		0.731 0.731
Irf2
M00805_2.00 		Mus musculus
NDWNHGAAAV
BTTTCDNWHN		 PBM
Weirauch et al.(2013)
pTH2835 		0.712 0.712
Irf2
M09245_2.00 		Mus musculus
NRAANNGAAASYGAAASYRV
BYRSTTTCRSTTTCNNTTYN		 Misc
Kulakovskiy et al.(2013)
IRF2_MOUSE.H11MO.0.B 		0.712 0.712
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ogr18974 IRF 38 89

Links

Other IRF family TFs
Other Ophisaurus gracilis TFs

5 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANIA_01729 Aspergillus nidulans CADANIAG00008374 D
PDE_08811 Penicillium oxalicum PDE_08811 I
PMAA_073600 Penicillium marneffei PMAA_073600 I
Pc12g08840 Penicillium chrysogenum Pc12g08840 I
U727_0043150051 Penicillium solitum U727_0043150051 I
TSTA_094060 Talaromyces stipitatus TSTA_094060 I
PMAA_073600 Talaromyces marneffei PMAA_073600 I
PITC_096370 Penicillium italicum PITC_096370 I
PEX1_074170 Penicillium expansum PEX1_074170 I
PDIP_36160 Penicillium digitatum PDIP_36160 I
ACLA_083620 Aspergillus clavatus CADACLAG00007771 I
PCH_Pc12g08840 Penicillium rubens PCH_Pc12g08840 I
OIDMADRAFT_106725 Oidiodendron maius OIDMADRAFT_106725 I
EURHEDRAFT_377589 Aspergillus ruber EURHEDRAFT_377589 I
NFIA_054440 Neosartorya fischeri CADNFIAG00005184 I
ATEG_06629 Aspergillus terreus CADATEAG00009107 I
CADANGAG00008951 Aspergillus niger CADANGAG00008951 I
AFUA_6G08790 Aspergillus fumigatus CADAFUAG00001570 I
CADAFLAG00009914 Aspergillus flavus CADAFLAG00009914 I
PVAR5_3823 Byssochlamys spectabilis PVAR5_3823 N